Clone Read LE_HBa0118N03_SP6_40948

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0118N03_SP6_40948
Primer
SP6
ID from Seq. Facility
LE_HBa_118_N03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
835 trimmed for vector and quality, 902 raw
Genbank Accession
Sequence
>LE_HBa0118N03_SP6_40948 (raw untrimmed)
TGCGCAAGATATGAGATTTTATTTGTCAATGTTGAGTTTGTGTTTTTGAGAAGAGACTAAAAAATCAACACAAACTCCTTTTGGAGAACCTATTGACTGA
AGGTCTACTGTTCAGGAACCTTTTTGGCCTACCACATCAGAGGTGACAGCTTTTTGATAGTTATCTTGTCACCTTTTCATGTAAGCAATCTTGAAGGGAC
CAGGTCCCTTGCAATGTTCTTTGTGAGTTCTTGAAGGCTTGCTGACTAACTTACTTCTTTGAATGAATGAATTTAATATGGTGTTTGTCATGTTGAAAAT
ATCAACCATAAAGAGTTATTACATGTTGGGAAAACACACCCCCGTCCATTCTGATTGGTTCAGTACGCTGGCGCCTCACCAACCACTGACATGATAGCTT
TAGAGATGTACCCCATTATGCATCTAATGGAGAGAACTCTGTCAGGGATCAGGTCCCTGCATTTGTGAGCCATTGAAACAGACAATCTCGTCCGCTCTTC
CTATTGGTGCAGAAAATTGCACTTTTCACCTATCACATGATATGACAACTTTATAGTTGTACTCCATTTGAATCTGGATGAGAGCACTCTGCCAAGGACT
AGGTTCCTACATTTGTTAAGGATCATCAAAACACCTAGAATATAACATTTTCTCCCTTTTTGATGATGATACATAAATATTCTTCACACTAAGTTTATTC
ATTCATTTCACCGTCATCAGTCCCAATAACAAGGATCTGATTCCCTGTTTGATCTCTAAGTTTGTTAATTTATCAAAACTTAACACCAGCTCCAAAATAA
AAGTTCATTTGCCGGCTATGATACCATGTTAGAATTAGACTTGCAAAATTTCAATGGAAATGCCCCGGCTTTACGACGGATAAAAAGAGATACCAAAATA
AA
>LE_HBa0118N03_SP6_40948 (trimmed for quality and cloning vector)
AATGTTGAGTTTGTGTTTTTGAGAAGAGACTAAAAAATCAACACAAACTCCTTTTGGAGAACCTATTGACTGAAGGTCTACTGTTCAGGAACCTTTTTGG
CCTACCACATCAGAGGTGACAGCTTTTTGATAGTTATCTTGTCACCTTTTCATGTAAGCAATCTTGAAGGGACCAGGTCCCTTGCAATGTTCTTTGTGAG
TTCTTGAAGGCTTGCTGACTAACTTACTTCTTTGAATGAATGAATTTAATATGGTGTTTGTCATGTTGAAAATATCAACCATAAAGAGTTATTACATGTT
GGGAAAACACACCCCCGTCCATTCTGATTGGTTCAGTACGCTGGCGCCTCACCAACCACTGACATGATAGCTTTAGAGATGTACCCCATTATGCATCTAA
TGGAGAGAACTCTGTCAGGGATCAGGTCCCTGCATTTGTGAGCCATTGAAACAGACAATCTCGTCCGCTCTTCCTATTGGTGCAGAAAATTGCACTTTTC
ACCTATCACATGATATGACAACTTTATAGTTGTACTCCATTTGAATCTGGATGAGAGCACTCTGCCAAGGACTAGGTTCCTACATTTGTTAAGGATCATC
AAAACACCTAGAATATAACATTTTCTCCCTTTTTGATGATGATACATAAATATTCTTCACACTAAGTTTATTCATTCATTTCACCGTCATCAGTCCCAAT
AACAAGGATCTGATTCCCTGTTTGATCTCTAAGTTTGTTAATTTATCAAAACTTAACACCAGCTCCAAAATAAAAGTTCATTTGCCGGCTATGATACCAT
GTTAGAATTAGACTTGCAAAATTTCAATGGAAATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954457
Expected error %
0.492184
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0118N03
Clone
Clone name
hba-118n3
LE_HBa0118N03
P118N03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found