Clone Read LE_HBa0119D16_SP6_41262

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0119D16_SP6_41262
Primer
SP6
ID from Seq. Facility
LE_HBa_119_D16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
546 trimmed for vector and quality, 771 raw
Genbank Accession
DU060714
Sequence
>LE_HBa0119D16_SP6_41262 (raw untrimmed)
AAAAAATGAGCACTAGAATGTCCTGCCAACTTATTAGATTTTTATAGACATTTATTTAGCGTGTGCATTAACTTTGCTACACAGGATTTCAGCGGTGATG
ATTCGGATGTTGAGTCTCGTAGGGATATTCATGTACAAGGAGTGACTTTAAAACCAACTGTAAACACTCAGCCCCATGCAGTTTCTAATGTTCCTTTCAG
CGAACAGCTGGAAAGATGTGGAAATGAAGTTGATGATCCTTGTGAATTAGCTGGTAGTGAGTCTCAGCGATCTATGGGTGGAATACTTCCATCTATGGAT
CCAGCTCATGGTATCTCCAGACGTGATTCAAGCGCAGACAAGTCTAGCAGCAAGCTAACTCCTCCTAACCTGAATGTCAAAAAGTCAACTTTTTGGGGGA
GAAGCAATGTGAGTTTTGGCTTTTATGGATTGATTTCACTTGGTGGGACTATTTATTTTTTGGGGGTTATACTCCATTTCAGTTGTAGTTAGTGTCACAG
TTTCTTTTGTTTATGGGTGATACATAAATATTTTCTTTCTATCACATGGTTAGTCTAATTTATGTGGTTATTACTCCCTCCGTTCACTTCTACTTGTCAC
TTTATTCCTAAAATGATTTTCATTTTTACCTTTTCAACTTTTGGCATATAAGAGAAAACAATATTTTCCCCCCTGGTTAACCCTTTATATGAAATATCTA
TTTTCAAATTATTTTCCTGGACCTCATTTTAGAGGGAGATATAGGGAAAACTAGCTACGCAACATTGTTTT
>LE_HBa0119D16_SP6_41262 (trimmed for quality and cloning vector)
CCTGCCAACTTATTAGATTTTTATAGACATTTATTTAGCGTGTGCATTAACTTTGCTACACAGGATTTCAGCGGTGATGATTCGGATGTTGAGTCTCGTA
GGGATATTCATGTACAAGGAGTGACTTTAAAACCAACTGTAAACACTCAGCCCCATGCAGTTTCTAATGTTCCTTTCAGCGAACAGCTGGAAAGATGTGG
AAATGAAGTTGATGATCCTTGTGAATTAGCTGGTAGTGAGTCTCAGCGATCTATGGGTGGAATACTTCCATCTATGGATCCAGCTCATGGTATCTCCAGA
CGTGATTCAAGCGCAGACAAGTCTAGCAGCAAGCTAACTCCTCCTAACCTGAATGTCAAAAAGTCAACTTTTTGGGGGAGAAGCAATGTGAGTTTTGGCT
TTTATGGATTGATTTCACTTGGTGGGACTATTTATTTTTTGGGGGTTATACTCCATTTCAGTTGTAGTTAGTGTCACAGTTTCTTTTGTTTATGGGTGAT
ACATAAATATTTTCTTTCTATCACATGGTTAGTCTAATTTATGTGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.971175
Expected error %
0.259349
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0119D16
Clone
Clone name
hba-119d16
LE_HBa0119D16
C11HBa0119D16
P119D16
Clone type
BAC
Contamination
none
Estimated length
116,905
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found