Clone Read LE_HBa0119P02_T7_41811

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0119P02_T7_41811
Primer
T7
ID from Seq. Facility
LE_HBa_119_P02-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1157 raw
Sequence
>LE_HBa0119P02_T7_41811 (raw untrimmed)
CACCCGCGTACAACTCNCACTCCCTGGATATTGTCAGATACTAGTTGTTCTCTACACGTANGTGATAGAGTGGCGCGTNCCCTCAATATAGCAGTCGACT
AGTCATGCATAGAGCCATTATATAGATTGACATACAGNAATCGTACTCGATAAGATGACGATCGCNTCGCGTAGACGAGGATCCTATGACATAGTTGCAT
ATATCGCATCATGTACTCCACATACATCTTCTATTGATACACTNTCACATTGTAACGCGCACTACGCGANCATCACACGAGCACTGGCTCATGTACTATA
CATGTGCATCTGTGTCATNTCATGCATAAGCTACGNCATCTGGTAGCAGGCGTCGACATGACGCATCCCTGNATACTCCTATCATGTTGCTTCGGCGATC
GATCGACGTGAGTGCGAATGACGACANAGCCACGACCTGCGATACCTCGTCGTGCAGGCTGGACGCTANGCACATTGCGTTACTACTGCGGAGCATCTGA
TGTTGACAGTACACTTACACTCTTTGTCTACGACTGCATCTCGCATTCCTNCNCTATAGCTTTCGCAGGTCCACGCTTCTATCGCTCTAAGTACTCTGAT
CTTCCATACACTTTTATGCTATGACCAATNGATTACTACATGAAAATGAAGTTAATCAATGAGATAAATGAAGAAGAATGCGAAGCATCTGATGGAGGAA
CTGGAGNGATCGGGATGCAGAATTGCCCTCGCTCACGCAGCCACCTCTTCACCTGTGCATCCCTGACTAGCTGCATCTCGTGGGTTGAGTGAGCAGCCTG
TCCTATCCCTACTGTCCGCTACCTATAGTCAANTCTTACGTTCCGCCACACTCATACTTCTACGCTCCGCTGCGCCNATTCTCACACATGCTACTCTACT
TTACTCTCTCCTATATACATATTTATCCTAGTTCTCTCACTTTCTTTTATTTCCTTCCGTGTGATTCTGAGAGTCTATTGTTATTNTATTCCATCCTGCG
ACACATCACCGTCCTCGNGGNNNGNNNNNNANNNNNNNNNGNNNNCAGGNNNGNNGGNGGGGNGNGNNGGGGGGTTNGGGGTGGGNNGGGGGAANGNGGG
NNGGGGNNGGGNGGGNGGGGGGGGGGGGGNNNGGGGGGGGGGNGGTTGGGTGNGNGN
>LE_HBa0119P02_T7_41811 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0119P02
Clone
Clone name
hba-119p2
LE_HBa0119P02
P119P02
Clone type
BAC
Contamination
none
Estimated length
102,873
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found