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Clone Read LE_HBa0121J06_T7_42299

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0121J06_T7_42299
Primer
T7
ID from Seq. Facility
LE_HBa_121_J06-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
758 trimmed for vector and quality, 841 raw
Sequence
>LE_HBa0121J06_T7_42299 (raw untrimmed)
ACTCGGTACCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTACATTCGAGAGATAGTTTGCCTGCTTATCAGTTCTGTAGTATCAAATGTT
TGTGATCTACAGTTCATAGGTTGTAGAGAAGGTTTGTTGAAAGTTTCCCTCATTAATGGTGTGGTGAGCCTTGCAAATAAAACCAAGTTGAGCTCATTGT
GATAATTGTGTTCTTTCTGTATTGTTCAACATATTGGTAAGGTGGCTTATAATTTGTCTTTGCCACCTGAATATTGAAGAAGATTTTGTTAGTATATTGT
ATGTGTGAATCTCTACATATTATACTGGGGGAGGAGAATATTTTATTAAAGGCTCAAAAGAAAGTAATCTATTTGAAAATGCTACTTGGATGCACTATTT
GGAACTCTTTATTTTATCAATTTCTAGCTCTCTATTAAGTCTTCTTCATTTTCTGATCATGGACTAATACTCTTTTCAATGGTATATGATGGGATTACTC
ATAAGGCTATGTTAACAAATCACTACTATAAATGCTAGATTACACGGACTATAATAAAAGATCATTCATAATTAACTTGCCCCACATGTTGTGCCATCAA
AATAATAACCCTAGGTTTTAATGCATGAAATCCTATGAATATTCTTTTCAGTTCTAGGAGTAAACCAAAATATGGAAGAAATGAATGAACGGAAGACACT
TACCTCAATAGAGAAAAAACCCGTGTTGGAAAAATCTTCTCTGAGGTTCTTTGGGAAAAAATTTTAAATTATGACTAAGTACGGAAAAAAACTAACATAA
AGACGCCAAGTTACTGTTTTCCGACCTTCTACGTAGCAAAC
>LE_HBa0121J06_T7_42299 (trimmed for quality and cloning vector)
AGCTTTACATTCGAGAGATAGTTTGCCTGCTTATCAGTTCTGTAGTATCAAATGTTTGTGATCTACAGTTCATAGGTTGTAGAGAAGGTTTGTTGAAAGT
TTCCCTCATTAATGGTGTGGTGAGCCTTGCAAATAAAACCAAGTTGAGCTCATTGTGATAATTGTGTTCTTTCTGTATTGTTCAACATATTGGTAAGGTG
GCTTATAATTTGTCTTTGCCACCTGAATATTGAAGAAGATTTTGTTAGTATATTGTATGTGTGAATCTCTACATATTATACTGGGGGAGGAGAATATTTT
ATTAAAGGCTCAAAAGAAAGTAATCTATTTGAAAATGCTACTTGGATGCACTATTTGGAACTCTTTATTTTATCAATTTCTAGCTCTCTATTAAGTCTTC
TTCATTTTCTGATCATGGACTAATACTCTTTTCAATGGTATATGATGGGATTACTCATAAGGCTATGTTAACAAATCACTACTATAAATGCTAGATTACA
CGGACTATAATAAAAGATCATTCATAATTAACTTGCCCCACATGTTGTGCCATCAAAATAATAACCCTAGGTTTTAATGCATGAAATCCTATGAATATTC
TTTTCAGTTCTAGGAGTAAACCAAAATATGGAAGAAATGAATGAACGGAAGACACTTACCTCAATAGAGAAAAAACCCGTGTTGGAAAAATCTTCTCTGA
GGTTCTTTGGGAAAAAATTTTAAATTATGACTAAGTACGGAAAAAAACTAACATAAAG

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.939903
Expected error %
4.67179
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0121J06
Clone
Clone name
hba-121j6
LE_HBa0121J06
C08HBa0121J06
P121J06
Clone type
BAC
Contamination
none
Estimated length
150,740
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found