Clone Read LE_HBa0053K10_SP6_43890

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0053K10_SP6_43890
Primer
SP6
ID from Seq. Facility
LE_HBa_053_K10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
679 trimmed for vector and quality, 951 raw
Sequence
>LE_HBa0053K10_SP6_43890 (raw untrimmed)
TGGAGGTTTATATTTTTTTTTTCTTTACAGTAATTTTTTTTTTTTGGCTTATTGTTTATTTTGACTTTTGATTAAGCAAATTATTTGTAATAATAATGAT
GTTATTATGATTTATGAAAAGTTTTATGAAGATCTGTCATTTTAGCATTTCTTATTCTTACTACTTGTCTGTTCCATGTGCACATAATATTTCTTAATTA
ATGGTTGGAATTTAATATACTTCTGACCTTATTTTTTTTCTCTCTAGTAATTATGGAATCATTAAATAATCTTTTTAATGATTCCATAATTACTAGAGAG
AAAATACAGTTCATTTTTATATAAGCAATTCTTTACTTTATTTTTGTGTTATTCTTTTCATGAATTTAGATTATCGTAAATCGACATAAGAAAAAATTAC
TCATTAAAATAAAGTAGAATATAATATTAATTGAATTCGATGAAATTATATTTTCTTAGAGACGCTTCTATATAGAATTAAATGTAAATGAACGATTATG
AACTAGTAACTTTTTAAGTAGTTGATTATAATCTAACAAATCTCTTTACATTATCAATATGTAAACATGCATTAACCATTTAATTTATTCAATTTTATTT
TATTCGTAATTTTAATGGAAATGGAATCCCCATTTTGTTGGAATTTTATTGGATGGCAAAATTAAATTGTCTCTCCACTACAAGACATATATATAATTTT
AGATTGATTGAAATACTTGGATAATGTTTGTGTTCCTTTCTTTGTAACTAAATTTCATTGAACCAATTAAAAACACATTTAAATGTCTTGGTACAGCTGA
CATTTTTATTATTTTAATTTATTAGTTTTGGACCGCCAACTTTTAATGTAACAATTTTATCCCCCAAATTTGACAAAAGTAAAATAAAAATTTATATTGA
TCCTTTTCAAAAATTAAAGAAATTTTATAATTCCCAATTTTTTCTTTAATG
>LE_HBa0053K10_SP6_43890 (trimmed for quality and cloning vector)
TTCTTTACAGTAATTTTTTTTTTTTGGCTTATTGTTTATTTTGACTTTTGATTAAGCAAATTATTTGTAATAATAATGATGTTATTATGATTTATGAAAA
GTTTTATGAAGATCTGTCATTTTAGCATTTCTTATTCTTACTACTTGTCTGTTCCATGTGCACATAATATTTCTTAATTAATGGTTGGAATTTAATATAC
TTCTGACCTTATTTTTTTTCTCTCTAGTAATTATGGAATCATTAAATAATCTTTTTAATGATTCCATAATTACTAGAGAGAAAATACAGTTCATTTTTAT
ATAAGCAATTCTTTACTTTATTTTTGTGTTATTCTTTTCATGAATTTAGATTATCGTAAATCGACATAAGAAAAAATTACTCATTAAAATAAAGTAGAAT
ATAATATTAATTGAATTCGATGAAATTATATTTTCTTAGAGACGCTTCTATATAGAATTAAATGTAAATGAACGATTATGAACTAGTAACTTTTTAAGTA
GTTGATTATAATCTAACAAATCTCTTTACATTATCAATATGTAAACATGCATTAACCATTTAATTTATTCAATTTTATTTTATTCGTAATTTTAATGGAA
ATGGAATCCCCATTTTGTTGGAATTTTATTGGATGGCAAAATTAAATTGTCTCTCCACTACAAGACATATATATAATTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.87107
Expected error %
0.0837018
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0053K10
Clone
Clone name
hba-53k10
LE_HBa0053K10
P053K10
Clone type
BAC
Contamination
none
Estimated length
110,406
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found