Clone Read LE_HBa0057E23_SP6_45164

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0057E23_SP6_45164
Primer
SP6
ID from Seq. Facility
LE_HBa_057_E23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
438 trimmed for vector and quality, 885 raw
Sequence
>LE_HBa0057E23_SP6_45164 (raw untrimmed)
AATAGGTCCTTCCTCTCCACCTGTGTACCNNNNNNNNNNATCNNGNGNGAAAAATTGAGGNTNANNTTNNANNAANAAAATCAAAAAATGCGACACAATA
CCTTTGATTTGTGTATTTGAAAAAAGGGAACCCCTCC
GAGGTTGAAAAATCTGAAAAAATCTGAATTTTATTAGTTTGGTTTGATTTATAAATTTAAAAT
TTTTATATAAATAATTTGATTTGATATTTGGAGAATTCGAACCAATCCGATCATATACACCCCTACAAGAAATAATGAAATTTCTAAGTGATTTTCTTTG
AAATGGAGTACTATTAACTTTAGTTTACGATTTGTGATATGTTTTCAAGAGAATTAAGTAACCGGAAGCAAAGTGATTACAATTCAAACAATATCATCAC
AAGTTTGAATTGTAAAATTATATTTTTTTAATTATTCTTTAGTTGAGCGGTCACTGTTTCTTAATAATCAATAGAAAATTAATTAGGAAATAAGAAGAAT
TTGTCTTCTTAATTTTATTTCTGCCGCGAAACTCTTATGGACACCATCTATTATTTCATAGTAATTTATCTAGTTTTCAGCAACAACCTAATGGTGTCCA
TCACTTTTAATTCTAATAAATATCTTTTTTTTTTTTTGTTACGATTTTGAAATTTTGAACATAATTTTTGACCTTACATATTAACCCTTATCCATTACAA
TTTGAATTTTGGTACCCTACCTTTTGACCCTGACCTTTTTACCCATCTCCAAAACACAACGTTTTCTATTAATTTTTTCGTTAGAAAATTTTTAAATTAC
TCGATGAAATGCTTCGTTTAATTTTTTTTCCCTAATGAAAAAAACTGCCCTTATTCTTTTATCTTGCTGGACACCCACACAAAAG
>LE_HBa0057E23_SP6_45164 (trimmed for quality and cloning vector)
GAGGTTGAAAAATCTGAAAAAATCTGAATTTTATTAGTTTGGTTTGATTTATAAATTTAAAATTTTTATATAAATAATTTGATTTGATATTTGGAGAATT
CGAACCAATCCGATCATATACACCCCTACAAGAAATAATGAAATTTCTAAGTGATTTTCTTTGAAATGGAGTACTATTAACTTTAGTTTACGATTTGTGA
TATGTTTTCAAGAGAATTAAGTAACCGGAAGCAAAGTGATTACAATTCAAACAATATCATCACAAGTTTGAATTGTAAAATTATATTTTTTTAATTATTC
TTTAGTTGAGCGGTCACTGTTTCTTAATAATCAATAGAAAATTAATTAGGAAATAAGAAGAATTTGTCTTCTTAATTTTATTTCTGCCGCGAAACTCTTA
TGGACACCATCTATTATTTCATAGTAATTTATCTAGTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.887897
Expected error %
0.9557
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0057E23
Clone
Clone name
hba-57e23
LE_HBa0057E23
C07HBa0057E23
P057E23
Clone type
BAC
Contamination
none
Estimated length
93,523
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found