Clone Read LE_HBa0058I03_SP6_46084

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0058I03_SP6_46084
Primer
SP6
ID from Seq. Facility
LE_HBa_058_I03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
741 trimmed for vector and quality, 843 raw
Sequence
>LE_HBa0058I03_SP6_46084 (raw untrimmed)
CCCCGTCTATCGCAGGCTTTCTGTTAGAGATTTCAAGTTCGGAATGGCAAAAGTAAAGAGGTTGTCCCTGGATTGAGCTCGTCGCTTGGTGCGGGATACC
TCTCCTATGTGGTTTGTGAGCTATTGCATAGGAGCGGAGGTTTAATCCTGTGCGCATTCAAAGGATAGTAGTTGTAGTGGCTGTGAATTTCCCTTGTTAT
AAAAAAAAAAACCTTCATTTCATGAAAACCTATGCTCTACTATTAGCAAATGTATTTTTGCAAATTAACAAGTTAAATGTAAGTAGGCACTCTCCAAAAG
TACTTCATACTAAGCATTCATAGGATACACCAAATGATAAACAAGGTTTTATTCAATTCTCTTTTGCCATATTGTGATCTTGATATTTGGTATGATACTG
ATAATCTAGTCTAACGTACAGGAAAGGCGTCTCATAATTGTAGGCGTCGAAGTTAAGGTCATGAGTTCGATTCTCAGGAACAACATGATGTGTTTGGAAA
GTGTTGGGGGAGAGATAGTTGGATAATACTAATATTCTGTCTATGGCAAAGGGCCGGAGATTGCTTGGTTAGAGTCACAGTCAAATATTACGCTTACTTT
GATAAGTTTTATTAAGAAATAAAGTTGTGTTTTTACTATTAACTATTGCGTGTCGTAAATTACAATGGCAGGTGTTTGCACTCTACAAGTGGTGCCTTTT
CCCAATTTTGACTAAAACGGCAAACACTACATACGGGGAATTGGATAAAAAATATTAATCCACCACACCACTTTTGTGTTTCATCATCTTAGTTCTTATG
TGAGGGAGTAATTTTTTCATTCCGTCACTATTTTTTCTTATTG
>LE_HBa0058I03_SP6_46084 (trimmed for quality and cloning vector)
TCTGTTAGAGATTTCAAGTTCGGAATGGCAAAAGTAAAGAGGTTGTCCCTGGATTGAGCTCGTCGCTTGGTGCGGGATACCTCTCCTATGTGGTTTGTGA
GCTATTGCATAGGAGCGGAGGTTTAATCCTGTGCGCATTCAAAGGATAGTAGTTGTAGTGGCTGTGAATTTCCCTTGTTATAAAAAAAAAAACCTTCATT
TCATGAAAACCTATGCTCTACTATTAGCAAATGTATTTTTGCAAATTAACAAGTTAAATGTAAGTAGGCACTCTCCAAAAGTACTTCATACTAAGCATTC
ATAGGATACACCAAATGATAAACAAGGTTTTATTCAATTCTCTTTTGCCATATTGTGATCTTGATATTTGGTATGATACTGATAATCTAGTCTAACGTAC
AGGAAAGGCGTCTCATAATTGTAGGCGTCGAAGTTAAGGTCATGAGTTCGATTCTCAGGAACAACATGATGTGTTTGGAAAGTGTTGGGGGAGAGATAGT
TGGATAATACTAATATTCTGTCTATGGCAAAGGGCCGGAGATTGCTTGGTTAGAGTCACAGTCAAATATTACGCTTACTTTGATAAGTTTTATTAAGAAA
TAAAGTTGTGTTTTTACTATTAACTATTGCGTGTCGTAAATTACAATGGCAGGTGTTTGCACTCTACAAGTGGTGCCTTTTCCCAATTTTGACTAAAACG
GCAAACACTACATACGGGGAATTGGATAAAAAATATTAATC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.965175
Expected error %
0.16586
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0058I03
Clone
Clone name
hba-58i3
LE_HBa0058I03
C01HBa0058I03
P058I03
Clone type
BAC
Contamination
none
Estimated length
130,633
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found