Clone Read LE_HBa0059N16_SP6_47118

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0059N16_SP6_47118
Primer
SP6
ID from Seq. Facility
LE_HBa_059_N16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
723 trimmed for vector and quality, 825 raw
Sequence
>LE_HBa0059N16_SP6_47118 (raw untrimmed)
GGTATAGTTAACCTATNCAGAGTAATAAGCAANTTTCACCTCGTGTCCTTTGAAGGGGATGGAAGCAAGAATTCTGTCAAACGCACTTTGCCTATCTGTT
GTCACCATTACAAGATAATCCCCTCCATCATATATATCTCTAACCTTCAAAACACATGGAATTTTTCATATGTACATTCGGAAATAAATCATATTTCAAA
ACTAAGCATATAAATTTTTTTATAAAGTTATCAACTTTCCATCCAGAAAACTAAAATTCCTCTATCAAATCAATGCAATTAAGCTTTTCCACAACACCCA
AATCCCAAAACAAACAAAAACTAAAAAGGGGTCGGAGATAAAATTATAAACCACATTACTGTTCATATGAACCTCAACCCATCTTCCCCAAATTTATCCC
AAGCTTAAAGGGAATAAAGAATACAAGTTTTATTTCGAATTACCTTGCCTCTGATTTTGGACTTGAGTTGAGGTACAGTTAAATCAAGATGGGTTTCAGA
TAAGCAATTAGTTATTGAACTTTTGATAGCCCTCATGAGTTCTTCCTTGTGGTCATTGTTGGTTAATGCTACATGGGGTGGTGGACTTTGCTGCTGACTT
GACATAGTAATTAATGGGTATTTCTTGCATTTGGTTATCTTTGGGAATGATGCTGTTTTTGAGAAGGAAAAAAATGGTGAGTTCAAAGATTGAAGCTTTT
TATTTAGGGTTTTTGGAGGGTTTAAGGCTGGCAAAGCCATTGTTTTTCTCCTGTTTCTTTTTTTCTTCTTTCTTCTTTCAGGGTTAAAGGAAAGAAGATG
AACCATTGTTTGTTAATTTCGGATT
>LE_HBa0059N16_SP6_47118 (trimmed for quality and cloning vector)
CTTTGAAGGGGATGGAAGCAAGAATTCTGTCAAACGCACTTTGCCTATCTGTTGTCACCATTACAAGATAATCCCCTCCATCATATATATCTCTAACCTT
CAAAACACATGGAATTTTTCATATGTACATTCGGAAATAAATCATATTTCAAAACTAAGCATATAAATTTTTTTATAAAGTTATCAACTTTCCATCCAGA
AAACTAAAATTCCTCTATCAAATCAATGCAATTAAGCTTTTCCACAACACCCAAATCCCAAAACAAACAAAAACTAAAAAGGGGTCGGAGATAAAATTAT
AAACCACATTACTGTTCATATGAACCTCAACCCATCTTCCCCAAATTTATCCCAAGCTTAAAGGGAATAAAGAATACAAGTTTTATTTCGAATTACCTTG
CCTCTGATTTTGGACTTGAGTTGAGGTACAGTTAAATCAAGATGGGTTTCAGATAAGCAATTAGTTATTGAACTTTTGATAGCCCTCATGAGTTCTTCCT
TGTGGTCATTGTTGGTTAATGCTACATGGGGTGGTGGACTTTGCTGCTGACTTGACATAGTAATTAATGGGTATTTCTTGCATTTGGTTATCTTTGGGAA
TGATGCTGTTTTTGAGAAGGAAAAAAATGGTGAGTTCAAAGATTGAAGCTTTTTATTTAGGGTTTTTGGAGGGTTTAAGGCTGGCAAAGCCATTGTTTTT
CTCCTGTTTCTTTTTTTCTTCTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.934841
Expected error %
0.0908435
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAR06292.1| Score 143 E Value 5e-33 Identity 75.50% Align. Length 685bp (94.74%) Frame 3
SAICAR synthetase [Nicotiana tabacum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0059N16
Clone
Clone name
hba-59n16
LE_HBa0059N16
C12HBa0059N16
P059N16
Clone type
BAC
Contamination
none
Estimated length
48,438
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found