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Clone Read LE_HBa0061B22_T7_47323

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0061B22_T7_47323
Primer
T7
ID from Seq. Facility
LE_HBa_061_B22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 961 raw
Sequence
>LE_HBa0061B22_T7_47323 (raw untrimmed)
GCATTGATGTGATTATACCNACACACAGTCCTCTAAGAGAGTCACTAATTTTATATAAGAAAGACATCTAGGTCGCAAGATGCTAACGAAGCGACGTAAC
TCAGAAACGATACAGGGTAGACAATAGTCTCGAGTGGTTNCCTGACTGGTGACCTCTATTGACACTGAATACTACCCTTGGTTTGCATCTCCACAGTATA
CGAAGTACTGTAAATCACTACTGTGGATTAGTACTATCACTCGCATACGTACTCGCGCTCTTCTTACATCTACATATATAGCTAACTCGAGTATCGGCTT
CGAAGCACCCTAATCGCTCTTGCCTGGGACCATCGCGTGGATTGTGAGGTGATAGTGTGTGGTATTTTGACTGCGTTTGGGAGTTGCTCGCCAGTCGCGC
GTTGGGGCTGCGAATCTCGTCCGCCCAGCAACATGCCGTAGCACTCCTCAGACAAACAATCCTGCTCTCGCAAACTATCGAGACTCTACATCAAAAATAG
TGCGATCACTCTTACGAACCCGCACATAGTAGACNGAGACAAACATTTGATGATGCGAGCGGAACGCTGTGTGGGTACTGCAAACTTCAACTGAAATGAC
GCTTCGAACTTCAACACATTAATGCGTCACACCAAGCGATGCGGACGATAAACCAAGAAATATATCAATAATATCATGCGCAGAAGCAGCGCTGTACAAA
TAGTCGCGCACTCTAATCGTACGGACNGAAAACGAAACAGCATTCATATACCACCCTAGCTCAGAGTGCGTGTAATCCCGCGCACGGCACACTACACGAG
AGCTGCGACATTGGATATAAACTCTGAACCTGTATAGATAAACTACTGCTGACCACAGGCAGCAACACTATCTCGCTACTCACAACATATGTATGACGTG
ACATACCGATCGTTAGAAGACGAAATCTCACAACTAGTATGTAACCTGAGACTAGATGTCA
>LE_HBa0061B22_T7_47323 (trimmed for quality and cloning vector)
G

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0061B22
Clone
Clone name
hba-61b22
LE_HBa0061B22
C02HBa0061B22
P061B22
Clone type
BAC
Contamination
none
Estimated length
99,667
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found