Clone Read LE_HBa0001A24_T7_48

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001A24_T7_48
Primer
T7
ID from Seq. Facility
Le-HBa001_A24-T7.ab1
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1822 raw
Sequence
>LE_HBa0001A24_T7_48 (raw untrimmed)
AGGGGGGACAATCTCNTACAAGGAAATCGAACACACGCTGTGCGGAGGGCGAACGCGAACGCGTGTAGCTGCCTACAACGACGTACGAGTTACCGCCCCC
TTCTCCTCTCTTTGTGAGAGGGTGTGCGACGACATGTTATAAAAGTAAGCTGCGCCCCCCCCCCTCCCCCTTTTGAGAGGGGGCATCAAANGAATTTCGC
TCACTACAAGATGACGAACGCGAATTGAAGGTTAATCAACGAATGAGGACAAGGAAATACCCAACTTATTACTCTCCCCGGAGGGGGAGAGTCTNAGCGC
TGTCTGAACACGCACGCGGGAACGAAGAGAGCGAGAAAGCCCACAGCAGACATAGCAAGACAGCGTGAGTGCAAGCGGCTACGCGACTATAGTGGCAAGG
GAGTCGCGGAGATGACATAATTGAACCGACAGAGACAGCCACTGAACTCCGCGCGTGAGAGAGAAGCCCTTCAACGCACCAGCAGATCACTCGCAGCGCA
AAGCAGCAGAGAAACACAACAGCTAGGAAAAGGAGAACGAAAACAGAAACAACAACACAGCGCGAAAAGAAATGCAACAAATACGATCACGTTCGATCGC
ACAGAAAGGAGAGACAGGAGAAGGGTACGCTGGAGGCCGCGACAGCGTAGGGACACAGGACAGGACTATCGAGTAGCAAAGGCACGCACGTGCGTCCATA
CGTTCAAATCGATCTACAGGACAAAGGCCGGCACAGACTCTGTCGGACCGACAGGCGAACTGCAGGACGGCCAGCACCCGCATATCAAGCCGCTGTAGAG
CCTGATGACGAACCGCGAACTAGAGCATCATCCGCAGACGGACTAGGGACCAACAACCAGAGCGCAAGCATAAACAGAAGGTACGACCAACCGAGAACAA
CTGGCCGCATACTCGCGGACGCGCACACGCGTTGCGAGCGAACCCAGAACAAACAACACGAAGCGACATAGCGTAATACCAACGCACAAATCAGGTGGCA
CGACACACGAAAGCCGAGACACGAAGAGAACCAACTGAACACAAACACAATAACAAGAAGAAACTAGAAAAAAGGAAAAGACAACCAGGCACCGAGCACA
TGGGCATAACGGCCCAAAGTCACCGTCACCCTCTAAACATACCAAACACATGAATAACAACCAAAGACAAGAACAAAGTCTCTATCACATGTCAAATACA
CGTAAGAAACTAGACAACGAGAACAACAAACCCAGCAGCAACAGGGAGTAAGTGATTCCCTAGATCCCGTAGACACACCAAATGACGTGCGACTCACCGA
CACGCAACCGAACGGGACACTAAACAACACACACCGCCACGGACAGAACGGCGCAAATTCGGAGGAAGCCAGCCAACCAACACTAGAACACAGAAAGATC
ATATACTGCGACGTAGCACAGCAAGGATACGTTGCCAGATCCGTGTGGAAGCAAAGAAAGCGAAATGGCATGCACGATATGCGACATTCAGAGACGGCGA
GCAGCACCAAATAGTGGAACAAAGGGAGACCGCCAGTCTAAGACCGCTACGCCAAAGCGCCCGCCGAGACCCCCCGCGGCGCGCGACGCGGAGCACGACC
GACGCGCTCATAACTCCACGCCCGCCAACACACACTTCACACGTCATTCGTCCACTATCACCAGCCCGTCTG
AAAACAGAGACAAGTGGGTACTCTACAC
ACGACGGACCCCGCGACCCGTGATATGGTCTATTGTGGCTTCGCGTCTGCCGCATTGATGAACACGCACCAATCAGANAGAGACGACGAGTGCAGTGCGG
CATGGATTAGCACTACGCATTA
>LE_HBa0001A24_T7_48 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.699054
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001A24
Clone
Clone name
hba-1a24
LE_HBa0001A24
P001A24
Clone type
BAC
Contamination
none
Estimated length
109,796
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found