Clone Read LE_HBa0066F17_SP6_50576

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0066F17_SP6_50576
Primer
SP6
ID from Seq. Facility
LE_HBa_066_F17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
694 trimmed for vector and quality, 906 raw
Sequence
>LE_HBa0066F17_SP6_50576 (raw untrimmed)
CCGCGCACTATGGGTCAAGATTTTTTTCAACACCTTTTGCTGGGGATTGGGGAAGAAGGATATCACACAGGGTGGGCAAAGAGTCCAGAAAAGAGTTTAT
GAGGATCAATCTACCCCCTGGGGATAGATATTGAGCCTTCCATCTAGCAAGTTCCTTTTCAGTTCCTCCAGAATACCATTCCATATCTCCATTGTTTTGT
GTTCGCTACCCAGGGGCATGCCAGGTCGATGGTACGCAAATGCTCCACTCTGCATCCCAGTATACTTGCAAGTTGCTGGATCTGAGGACCTCATTAACAG
GAAAGCGACCACTTCTTCCAAAGTTTACTTTCAACCCTGAAACTGCTTCAAACAAAACCAAAATCACTCTTGATGTAGCTAATCTGTTATGCTGTAGGTT
CAGAAAGAATGGTAGTGTCATCCGCATAGAGCATATGACACTTTTTTTCTTCCCCCACTCTATCTCTGATCTGAAAATCTCTAATCCATCTGTTTTGTGT
TGTAATCCTCATCATACTATCGAAGCCTTCCATTGCCAAAATGATTAAGAAAGGGGAGAGAGGATCACCCTGTTTCAACCTTTTTTCTGATTCTAAAAGC
CCACAGATTGCCCATTCACAAGGACAGAAAACTTGACTGTTTTTATACATATCTCAATCCACTTCATCCATTTGCTACCAAATCCCATTTGTTTTGAGAG
TACTCAGAGGGAAAGACCAATTCACATGGTCATAGGCTTTCTGAGTATCCAATTTGAACATTAGAACAGGGGCTCCGCCGTTCATTCTTGAATCCGTGCA
TTCACTAGCAATGAATGTGGCATCCATGATTTGCCCTCCCTTTACAAAAGCCATTTGATGTGTGTTGATCCATTTAAACGCCCCCTTTTTTAAATACCAA
ATTATT
>LE_HBa0066F17_SP6_50576 (trimmed for quality and cloning vector)
GAAGAAGGATATCACACAGGGTGGGCAAAGAGTCCAGAAAAGAGTTTATGAGGATCAATCTACCCCCTGGGGATAGATATTGAGCCTTCCATCTAGCAAG
TTCCTTTTCAGTTCCTCCAGAATACCATTCCATATCTCCATTGTTTTGTGTTCGCTACCCAGGGGCATGCCAGGTCGATGGTACGCAAATGCTCCACTCT
GCATCCCAGTATACTTGCAAGTTGCTGGATCTGAGGACCTCATTAACAGGAAAGCGACCACTTCTTCCAAAGTTTACTTTCAACCCTGAAACTGCTTCAA
ACAAAACCAAAATCACTCTTGATGTAGCTAATCTGTTATGCTGTAGGTTCAGAAAGAATGGTAGTGTCATCCGCATAGAGCATATGACACTTTTTTTCTT
CCCCCACTCTATCTCTGATCTGAAAATCTCTAATCCATCTGTTTTGTGTTGTAATCCTCATCATACTATCGAAGCCTTCCATTGCCAAAATGATTAAGAA
AGGGGAGAGAGGATCACCCTGTTTCAACCTTTTTTCTGATTCTAAAAGCCCACAGATTGCCCATTCACAAGGACAGAAAACTTGACTGTTTTTATACATA
TCTCAATCCACTTCATCCATTTGCTACCAAATCCCATTTGTTTTGAGAGTACTCAGAGGGAAAGACCAATTCACATGGTCATAGGCTTTCTGAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.966129
Expected error %
0.308704
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0066F17
Clone
Clone name
hba-66f17
LE_HBa0066F17
P066F17
Clone type
BAC
Contamination
none
Estimated length
71,698
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found