Clone Read LE_HBa0010K15_T7_5117

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0010K15_T7_5117
Primer
T7
ID from Seq. Facility
LE_HBa_010_K15-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
249 trimmed for vector and quality, 960 raw
Sequence
>LE_HBa0010K15_T7_5117 (raw untrimmed)
GGGGTAAAGGGGTCCGAGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCATTAGTCTCCATCGAACCTTCCATTAAAGGGGGNAGAAAGAGAAA
AANAGNAAANAAGAGAATCCTTAAAGGGGGAANNAANNNANGAAGGAAAAANNAAGANNNANANGAANAAGGNNNAGAAANNAAGANAGAANNACGGAAG
GANNANGAAAGNGGGAAAAGAGAGGGGNAAGAGNGGNGNNGAGAAGAAGAAGAGGAAGGGGAAGAAGAAGAAGAAGAANGAGAGAAAANAGAGAGAAAAN
GNGANGGGNANGAAGAGAAAAAAGANGGAAGGAAAAGAANGAAGGGAAAANGANGGAAAAAGGAGGAAGGAGAGAAAGGGAAGNAAGAAAAAAAANGAAG
GGAGAAAGGAGNGGAGAAAAGAGAAAAANGNGGAAAGNNGGAGGAGANGNGNAAGGGAGAGGAAGGGAAGGAGANAGANGGAAAAAAAAGAAAGAGGGAG
NNANAAGGGAAAAGNAGAAGAGAAGGAGGAGNGAGAANGAANANANAAGAAAGGAGGAAGAAGGGAGAGAAGGAANNGAAAGAGGAAGAGGNANGAAAAA
ANAAAGAGGAAAAGGAAAGGNAAAAGAAGAAGAGAAGNGAAGAGNGGAGNNNGAGAAGAAGGAAAGAANNNANAAAGGGGGAAAAGAAAGAGGGAAGAAA
GGAGAGAGGGAAANGGNAAANAAAGGGAAAAGGGGGGGGNAAAAAAAAGAAAGAAGAAAAAGGAAAGAAAGAAGAAAAAAAANGGGGAAAGGGAAAAAAA
GGGGAAAAGAGGAAGAGGAAAAAAAGGGAAAAAAAAGAAAAAAAAAGGGAAGAAGGAAGAAAAAAAAGAAAAAAAAAAAAGAAAAAAAAAAAAAAAAGGG
AGNAAAAAAGGAAGGGNAANAAAAAAAAAGAAGGAAGAGGGGAAGAAAAAAAAGAAAAAA
>LE_HBa0010K15_T7_5117 (trimmed for quality and cloning vector)
AGCTTCATTAGTCTCCATCGAACCTTCCATTAAAGGGGGNAGAAAGAGAAAAANAGNAAANAAGAGAATCCTTAAAGGGGGAANNAANNNANGAAGGAAA
AANNAAGANNNANANGAANAAGGNNNAGAAANNAAGANAGAANNACGGAAGGANNANGAAAGNGGGAAAAGAGAGGGGNAAGAGNGGNGNNGAGAAGAAG
AAGAGGAAGGGGAAGAAGAAGAAGAAGAANGAGAGAAAANAGAGAGAAA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.879801
Expected error %
28.4505
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0010K15
Clone
Clone name
hba-10k15
LE_HBa0010K15
P010K15
Clone type
BAC
Contamination
none
Estimated length
131,956
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found