Clone Read LE_HBa0010L09_T7_5153

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0010L09_T7_5153
Primer
T7
ID from Seq. Facility
LE_HBa_010_L09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
41 trimmed for vector and quality, 676 raw
Sequence
>LE_HBa0010L09_T7_5153 (raw untrimmed)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTTTTGAGTNGGNNNNNNNNNNNNNNNNN
NNNNTTTGTNTCTTCTTGGGTTACACGTGANAACCANATTTTGAGTTANTGTTNAGAATGAATAANTTTTCCNCCTNTGNCTTGCTCTTGTTTNANANTT
NTGGATTTCANTAANTTN
CTTTGGGTTGAAGCTGACTTGTCTTGATCNAAAAAGAAAAGTGTNNNNNAANNCNNTNNNGGAANNNNNNNNNNNNNTTGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>LE_HBa0010L09_T7_5153 (trimmed for quality and cloning vector)
CTTTGGGTTGAAGCTGACTTGTCTTGATCNAAAAAGAAAAG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
  • High predicted error rate
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.800925
Expected error %
6.81487
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0010L09
Clone
Clone name
hba-10l9
LE_HBa0010L09
C03HBa0010L09
P010L09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found