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Clone Read LE_HBa0067O14_SP6_51770

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0067O14_SP6_51770
Primer
SP6
ID from Seq. Facility
LE_HBa_067_O14-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1489 raw
Sequence
>LE_HBa0067O14_SP6_51770 (raw untrimmed)
CTATAGGGGTTGATGCAAGGAGGGNCCAACCACACAACACAAAAACNCACAAGGAGAACACAAAAACACGAGGAGAAAGACGGCCACAGAAGCGGGCAAG
CACGAAGCAAAAAGCCCCACCATCTAATAGAAGAGGCAAAAGAACAACGGCAGCAGCACAGAAAGAGGAAAAAGGCGGAGGGGGCCCACTTCACGAGAGC
ACCCTTTCTGCTACTCTTCTATTATTTACTGATAAATATATACATTTACATATAATGAGTCATATACTACTGCTTCGTCTACCTTGCTTCTCAACCTCAC
ATGTCCCAACAGTATATCCTCGTTAGTCGGAGTTGAACAGGTACATTGTGGAGATGATAACGTAACAAGAATATGCAGTCACTATGCTGGCGCGTAGAAG
AGGATAGCACAAATNGATGACGATTTCAAGATTTCAGGATAATAGTCATCACATCATGCGCGTTGTCTCACGCGGCGCGTGTAGAATAGGTGGAGAGGTG
TGGTCAAAGACTGAATGGCTTGTAAGCACATTAACTTGTCGTCTCCTATCATACACAAACAAGCATATAAGCACATTAGTAGGAGTTGTCGAGTGCTCCA
TTCAATCATGGTGATTGATCGCTACGCGCATTGGTTAGCTGTGTAGCNTTATGTGATTGGAGGATCNGAGTATTNCTGAAGAGGTGGCGCGTAAGAACGA
CAGGTGAGCATGGATATAGAGAATATTGAGAAAAGCTCAACGCCAGGNCATGGTTTACACGTGACGCAGGTTGCAGTATCGTGGCATACTAGATGGATAT
CTGCGTATGGTATTGAAATTGCAAGGCGATGACTGAGGAGATTGAGGGATACACAGCGAGGGATATGCTAGATTATGAGATACTAGACTCANTNCTGATC
GATATCAAATTGTAGCTACNATATAAGTACGTATAGGATGTGATAGAAATCTTATCTGATATGCGTACCGATCGTTACTCCTTATACATGCTCTGTGTGC
TTCATATTCTGCCATCTAATATATTCTCATTGGTTTACCTACTCCACCCCTCTGATGCGCGCTCGATACGCGACACTCGAGCACGACGAGTGAGTGANGT
CGTAGGTCGAATGATCTGGCGCATATGACGCAAGCNGTGTCTTGTCACGGCTGACAATGACAACATTGTATTCCTTGACATGATATACGNTAGTGTACGC
NATCTAGCGCGTGCGGACGGTATCCAGTATGAAGATTGTCCTACGATGACCTGCGACTGTACGCATAGTATGTACACCGTTCGTCTTATCGCATCTACGC
TGGCCGGCGATAGTCGGAGAAACATTTCTAGAATGACAGTGTGTGTGTATGCGTATGTGGGATGTCGTGTGACTTGTTGATCGTATATTGAAACATGCCG
ATGTCAGTTCTCTTGACACACTNGTTCGTAACGAACATGTNGTCAATAATACGAGTGCATAAGATGCGGTGACAGTGTGGATGACGCGA
>LE_HBa0067O14_SP6_51770 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0067O14
Clone
Clone name
hba-67o14
LE_HBa0067O14
C03HBa0067O14
P067O14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found