Clone Read LE_HBa0067O14_T7_51771

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0067O14_T7_51771
Primer
T7
ID from Seq. Facility
LE_HBa_067_O14-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 2122 raw
Sequence
>LE_HBa0067O14_T7_51771 (raw untrimmed)
CATCGCGCANTAGCGACGCTCTCTGAGGAGCTGGCGTAGNGCGCGTCACTACACGTGCAGTCTACGCAGCAGCACCTAGAGTCANAGAGAGCAGCTGGTG
CAACAGNACCGGTACTTTNGCTCACGGCGTACAGCANATANTGAGAGACNTATCTAGACCAGCCCCCACGTTTCTNGATAGGAAGAGAGGACCGCGCGAT
AGATCTCNAGATGCTGGAGATTGANNTACGCNCCTAGCNNTAGCTTGCGCATCGACGCCTCTCCTTCTAACAACGAGGAGGGCACAAGANCGAGAACAGA
TATGACAGAANCTCNGTGCATAGACGCGGGGCAGAGACGAGGCAGTGAGCACTGCACGNTNCTTATGCGGTCAGGCCGTNCGCTNTNATAGTACTGTGTG
CATCTTTCTGTCGCGTCAGNAAAGCTTGTATGTGTCGCGCGCAGCTNCGCCGCTTGACANGNCANCCTCGCANTGATACTCATCTCGCNCNANCNACTAC
AGCGTAGCCGCGCGCCANCGTGCACGACCACACTGCGCATCCACCTGGACGCNGNNTCTCGCTGTCNCTNCTCATCCNTTGAGGTCNAGATAACGTACTG
ACTCATCTATTNTGTAGACAATACGNGCATGCTGTACTGAGTGGACCTCTACGTCTTNTCATGTACACTGCTGANATCTGCGAGTNGCACGCNCGTATCT
GACGACGACGCTACTCTATCACACNCCAATGCACTNAGNGCATCGCATGNATGTCATGATNTCGNTGGAGACATCCTATCTATGGACAGGCGGTANCNGA
GTATACTGATGATGACGNCGCGCGCTANACGACCGCTGACTAGGAATCCGACTNATGAACTGAGGCAATGATGCATAANCGCGTNACNAGCGTGCATCAC
TGANGATACTCGCGCGGGTGATCGCACCCGATACTATGATCGCGNCGGTCGACTGACGNGCTCGTGCACATNCTACTTCTTGATCTNCTGTCATCGTGTC
ATTCTATGCCCTACTCNNCTATGCTAAGTGTGCTGTATCAGACATATGCTAGTATGAGCANACGCGNATTGATCGACACTGCTACGTACGCTGNTNTGTG
CTCAACTGCGCGACNCGTGCTCGAGGNATGAGANCGNCATCTCGACTGANCTGCATGCNTACGCTNNGCATCGACAAGACACTNGTTGANCGNACATGAC
ACACTNTNTNATTANNACTGTGCTGNGTACTGTGACGAGNGANANATNATGANGNCACACATGACTGTGCAGCTGATTCNCGNCTNCTGAGTGATCGNAG
CNTNCGGCGTGTGGGTCGTNCNGNCTNCCTACGCGCTGTACACTCTANCGTGACGTTTGTGCGATGTACAATNTNAAGATNGTGATGTNCTTGTNACANT
GACACANTGCGNAGTGCTNCTCANTCGACTNTCAGCCGNTGATATCATGCGTNCTCCGNTGTGCTNATNCTNGCTNATGCGAGNCGCTGNACGCAGCCTG
CACNGNCACGNTNCGTCAGGTNGCGATTGNACNGCTAANTGTAGGGTTTTNTAGCGTGACNGCGNGNGAGTGAACGNACGTACACGCNCANCTNTCCNCN
CTGTNCGTGNCACGTGCATTGNTGNAGTGTGCNGACAACCGCGACGCGCTTNTNCGATGCTAGCTCGACACTCAGCANATTGCTNGACTGACTCATNTNC
NCGACAGNCNTACACGATGTNGACTGTNCTNNTNCGNTGACTGCTCACATTTGTNCNCATGTNGNCANATGCTCGTNTCAATTNCTACGTCTCTCACGCN
ACACANACTGAGCGCGATAGCAGGAAGTCGCNGCTCACTCGTGTNCGCAGCACGANGCATCATGCGCGCGCGTGTGACGCACGAGATNGCAAAACGAAAN
AGTCGATGATAAGCGACGTGCGTGACTTGCTCGCGNCGGAGCTGTTGCAGTGACGTNAGACAGCACGAGAGCATGCGTTCGTNTCTCGTTCTGCNTGTNC
GTGGACTNCCGCGCTGCAGTGCTGCATCGGTCTGATCTCACTGTCACCTTCTNCATACTGATCATACGTGAGTGNGANGAACACGTGTGANGNGTGCTGC
GACGACTGNTNCNACAGTGNTA
>LE_HBa0067O14_T7_51771 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0067O14
Clone
Clone name
hba-67o14
LE_HBa0067O14
C03HBa0067O14
P067O14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found