Clone Read LE_HBa0003C20_SP6_53510

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0003C20_SP6_53510
Primer
SP6
ID from Seq. Facility
LE_HBa_003_C20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
710 trimmed for vector and quality, 787 raw
Genbank Accession
Sequence
>LE_HBa0003C20_SP6_53510 (raw untrimmed)
ATTTTTGTAATTTTTATTAACATGGTGTGTAGAGTGATGCGGTAAATGTGAGATTGTGGAGCTTGATTAATATTTAATATATTGTTATATATTAATGTTC
TTGTGATTCAACCTATAATACTCTGAATTAAGTTTACTCACGGGGTGTTACCACGAAATATTGGTTTCATTCTTTCTGTCTCTAGATCTCTCTCTCGAAA
GTTCTTGTGTTCTTCATTCATCAAGTGTGTGTGTGAATTCGATCATAACAGTAAAGTTTATATATTTTTTTATGATATAGATAATACTTATTCGTGCTAG
ATGACCTAAAATTTGAGAAGGTGTTAATTATTCTTTATTAACGTTTTGAATTATCATTGTTATGCCTTTGTTTAACTAACATCACATGAAATTTGAAAAT
TTATTGCGATAAATGCCTTATTCAATCACAAATTCTATATAATAAACTCTTTTTTATGCGCGATTTTCTATTAAATGAGTCTCACTTGATATGAATATGA
ATTAGTAGTGTTAATAAAGTCCAAATCCCTTAAAGATTTTGTTAGGCCGAAACTTTAATTTGCATTGAAGGACTTAACTTCAAGTTATTAGAAGTAGGAT
TAGACATTTCATAGAAATGATCTTCTTTATTTATTTTAGTTTGTTGATTTTGGGATTGGAAATTGGATTAAAGAGGAATTAAAATAACTTTTTAATTCAG
ATTTGTGTCAGAAAATTTTATTTCGAGGGAAGGGGAGGAGAATTAGGGTGGATGTGGAGGCAAAACTGGGTAAGGGCTCAAGAATTT
>LE_HBa0003C20_SP6_53510 (trimmed for quality and cloning vector)
ATGGTGTGTAGAGTGATGCGGTAAATGTGAGATTGTGGAGCTTGATTAATATTTAATATATTGTTATATATTAATGTTCTTGTGATTCAACCTATAATAC
TCTGAATTAAGTTTACTCACGGGGTGTTACCACGAAATATTGGTTTCATTCTTTCTGTCTCTAGATCTCTCTCTCGAAAGTTCTTGTGTTCTTCATTCAT
CAAGTGTGTGTGTGAATTCGATCATAACAGTAAAGTTTATATATTTTTTTATGATATAGATAATACTTATTCGTGCTAGATGACCTAAAATTTGAGAAGG
TGTTAATTATTCTTTATTAACGTTTTGAATTATCATTGTTATGCCTTTGTTTAACTAACATCACATGAAATTTGAAAATTTATTGCGATAAATGCCTTAT
TCAATCACAAATTCTATATAATAAACTCTTTTTTATGCGCGATTTTCTATTAAATGAGTCTCACTTGATATGAATATGAATTAGTAGTGTTAATAAAGTC
CAAATCCCTTAAAGATTTTGTTAGGCCGAAACTTTAATTTGCATTGAAGGACTTAACTTCAAGTTATTAGAAGTAGGATTAGACATTTCATAGAAATGAT
CTTCTTTATTTATTTTAGTTTGTTGATTTTGGGATTGGAAATTGGATTAAAGAGGAATTAAAATAACTTTTTAATTCAGATTTGTGTCAGAAAATTTTAT
TTCGAGGGAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.909982
Expected error %
0.0870608
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0003C20
Clone
Clone name
hba-3c20
LE_HBa0003C20
C05HBa0003C20
P003C20
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found