Clone Read LE_HBa0101F21_SP6_56728

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0101F21_SP6_56728
Primer
SP6
ID from Seq. Facility
LE_HBa_101_F21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1147 raw
Sequence
>LE_HBa0101F21_SP6_56728 (raw untrimmed)
CCCCCTTTCTTCTGCTGTATGCTGTGTCCGCTTTCTATTTTGTGCTTTCGTTATGTGTTCTGTGGATAATGTGGGGGGTTCCCCCTCCATCATGTGTGGT
GCTCATGCTTTTTGCTCTTTCTGTGTCGTGTTTTTCTCTTCTTCTTATCAATCAGGCCCATTTGTTCTGAGTGTTATTATCTTTCCTGTGTTACCATTTG
ATTTCCTCCGCACTCTAGACTGGTGTTAGTTATTTTTCTTCCCGCGTGATCAAGCTACAGCGAGTGTCGTGACGTCTCTAATCTCATTGTTTTCACAGCA
AAGTCCTGCACAGCTCCGAAGGAGCTGCGCGCGTCGACCGAAACTGTGTCATCGACCTGTGGCGCTTCTGCCTCGACTGTCCTCCCCTCATCATGAACGA
CCGGTCGATGGCGCGCGGTGCCGACGTCGCGCCTCCGCTCGTGCGAGCGAGGCTCAACTGGGACTGCGCGGCCGCAGGACGCACGCGGGTGAGATGTCTC
GGCTGCAGCTTCCGAGCTCATGCTACCCTACTACGATGCTGTGTAAACGTGCACACGGCTCACGATAGTTATCGTGTGATCTGTGTGTTGTGTCGTTTAG
TGTGCTCTGCTTCGTTTTTCGTTGTACGAGATCTCGAGGCTACTTGTTATGTTCTCACCTTTATTGATCCGTGCCGTGTCCGTCCACAGCCCTTGCCTCT
GTGTGCGATGCCTCTGAGCTCACCGGCCCATCCGCTTCTCCTTCCTGCTGCCATGTACGGTGTTGTGTACCTTCCTGATCCTCGCTTGTCCTCTTGCCGC
GATTGTACTACTGCACGATCCACATCCCCCCGCCGCACCTGTCATGTCGTCGTGCATATTCGGCGCTTACACGTCCCCCCATGCGCCGGCCCGCACGCGT
GATGGGACATGTCGCCAGCCACGCCCGCGACCCTCCGCGTAGATTGAACTCGATAGCGGATCTTGGGATGCGCTGACAAGACTCCTCGTCTATGTGCGCG
CCTGGTGCGTATGCCTGTCCGTAGTCTTGGTTCGATTTAATGACTTATTGTATTGATTCTTACACTGTACCATAATGGCCTCGACATGATATTGTTGGTC
TGCCTCTTTCGTGTCGATCACAGTGCCAAATGCGAATGATCGTGTGA
>LE_HBa0101F21_SP6_56728 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0101F21
Clone
Clone name
hba-101f21
LE_HBa0101F21
C02HBa0101F21
P101F21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found