Clone Read LE_HBa0101O15_T7_57149

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0101O15_T7_57149
Primer
T7
ID from Seq. Facility
LE_HBa_101_O15-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
779 trimmed for vector and quality, 822 raw
Sequence
>LE_HBa0101O15_T7_57149 (raw untrimmed)
TTGGGTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGATCCTCAGAATCAGGAACTCCCATATGGTGTTAAGAGGTATATACATATTT
CTTTTATAATCCCCTATCTTGTCAGTTACTTTCTTTTAAGTTGTTGAGGGTGTTTGTGATTCTTAAAATTGGTTTCCTTTTGGTGGTCTCGCCTGGTCTG
GTTTGTGTTTTACTTTTCTACTTTTTCTGCATTTCACCTATCTTATTTTTTATCAAGAAGACTTGGGAAAATATGTTTGTTATTGCAAGATGCGGTATTC
ATTTTGCAGATGTGTTGAGCAAATAAACAAGGCAAGTCGTGGAGATCTGACTCCAGAGGAGCTCAAAGAAAGACAGGTAATGTTTCTTTGCATTATATAA
TCTTATTTTGCTTGAGGTGAAGATCATCGGTGATGGTATAATATTTGTAAATTAATTTTATTGATTTATCTTTCACCACCCCCTCTTTTTTTTTTTTTTT
CGTTTTTTTNTACTTTTGTTTTTATATATATAATTTTAGTTTATTTTTTGTTCTATAATTGATGATAGAAATAATAAAATTATCTTTTTTTTTTTTTTTT
CGCTTTTTNTATTTTTTTTTTATTTTTTATTTTATTTTATTTATTTTTTTCTTAATATATAAATGTTTAAATATAGATATTAATTATATTTATTATTAGA
GATAAATATAAGAAAATTTTCTTCACCCCCCTTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTCT
TTTTTTTTTTTTTTTTTTTTTT
>LE_HBa0101O15_T7_57149 (trimmed for quality and cloning vector)
AGCTTGATCCTCAGAATCAGGAACTCCCATATGGTGTTAAGAGGTATATACATATTTCTTTTATAATCCCCTATCTTGTCAGTTACTTTCTTTTAAGTTG
TTGAGGGTGTTTGTGATTCTTAAAATTGGTTTCCTTTTGGTGGTCTCGCCTGGTCTGGTTTGTGTTTTACTTTTCTACTTTTTCTGCATTTCACCTATCT
TATTTTTTATCAAGAAGACTTGGGAAAATATGTTTGTTATTGCAAGATGCGGTATTCATTTTGCAGATGTGTTGAGCAAATAAACAAGGCAAGTCGTGGA
GATCTGACTCCAGAGGAGCTCAAAGAAAGACAGGTAATGTTTCTTTGCATTATATAATCTTATTTTGCTTGAGGTGAAGATCATCGGTGATGGTATAATA
TTTGTAAATTAATTTTATTGATTTATCTTTCACCACCCCCTCTTTTTTTTTTTTTTTCGTTTTTTTNTACTTTTGTTTTTATATATATAATTTTAGTTTA
TTTTTTGTTCTATAATTGATGATAGAAATAATAAAATTATCTTTTTTTTTTTTTTTTCGCTTTTTNTATTTTTTTTTTATTTTTTATTTTATTTTATTTA
TTTTTTTCTTAATATATAAATGTTTAAATATAGATATTAATTATATTTATTATTAGAGATAAATATAAGAAAATTTTCTTCACCCCCCTTTTTAATTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.841625
Expected error %
6.4749
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0101O15
Clone
Clone name
hba-101o15
LE_HBa0101O15
C08HBa0101O15
P101O15
Clone type
BAC
Contamination
none
Estimated length
118,518
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found