Clone Read LE_HBa0122A12_SP6_57238

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0122A12_SP6_57238
Primer
SP6
ID from Seq. Facility
LE_HBa_122_A12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
600 trimmed for vector and quality, 819 raw
Sequence
>LE_HBa0122A12_SP6_57238 (raw untrimmed)
GTTTTTCAATTTTTGGTGCTAGCATCATCAAAGACTTCTCCTTCCGGTTGTCTACATAATCAGACCTCAAGTTATTCTCACTAAATATTGAATGTGATAT
ATGACATCCGGCAGTTCTTTAGAAAATCAGAATAATGTTCCCTCCACTGGGAAAAAAATCAATTATAAAACAACAACCATCACACCTACAGAGAAGACCT
TACCAATTTTATGTGATCCAGCAGTCTTGCCTTCTCCTTTTTCCTTAACATCTGAATTGTTACAAGCTATGACCTAGTAGAAGAAGGTGCAATCGCAGAG
CAAACCAAAGTAACTAACTGAGTGAACTAATGGGAGAATATCCACATTTGAACTATTACAGTCCCACTCCAAATCCCCCCACATAGATGGCTCATTGTGA
GTGAAGGGGGACAAATAAAGAACATGGTGTACATACATTCTTTAAAATGTTGGCAAGTGGAGGAGACAGTGGACAGATCTTTTAGTCCTTCTTTCTACAA
AATAAGCAAATAATATCAAATTCCCAGCACATGTTCATATGAGACAAGGAAAAATGCATATCAACTACCTTAAGCAAATCTACAGCCTTAGAAATTGCAT
TATACCCATTCCATCTATACTGATTCTTAGCTTTTGATAATGAGTCATACTCCCTGTTTGCCTTTAGTCCTTCAATCTTATTAAGATTATGAAAAGAAAA
ATCAAAAGATACAGAATTACCCCCTCCCCCTCTCCTCAAAATTTGAGAAATTCAAAAATGCGACGCCTCTCGACCCTTCAACCCCAAAACCATAAAAGAA
TTTCTGTGTGGATTAATTT
>LE_HBa0122A12_SP6_57238 (trimmed for quality and cloning vector)
AAGACTTCTCCTTCCGGTTGTCTACATAATCAGACCTCAAGTTATTCTCACTAAATATTGAATGTGATATATGACATCCGGCAGTTCTTTAGAAAATCAG
AATAATGTTCCCTCCACTGGGAAAAAAATCAATTATAAAACAACAACCATCACACCTACAGAGAAGACCTTACCAATTTTATGTGATCCAGCAGTCTTGC
CTTCTCCTTTTTCCTTAACATCTGAATTGTTACAAGCTATGACCTAGTAGAAGAAGGTGCAATCGCAGAGCAAACCAAAGTAACTAACTGAGTGAACTAA
TGGGAGAATATCCACATTTGAACTATTACAGTCCCACTCCAAATCCCCCCACATAGATGGCTCATTGTGAGTGAAGGGGGACAAATAAAGAACATGGTGT
ACATACATTCTTTAAAATGTTGGCAAGTGGAGGAGACAGTGGACAGATCTTTTAGTCCTTCTTTCTACAAAATAAGCAAATAATATCAAATTCCCAGCAC
ATGTTCATATGAGACAAGGAAAAATGCATATCAACTACCTTAAGCAAATCTACAGCCTTAGAAATTGCATTATACCCATTCCATCTATACTGATTCTTAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.955524
Expected error %
0.907126
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0122A12
Clone
Clone name
hba-122a12
LE_HBa0122A12
P122A12
Clone type
BAC
Contamination
none
Estimated length
95,450
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found