Clone Read LE_HBa0122K04_SP6_57702

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0122K04_SP6_57702
Primer
SP6
ID from Seq. Facility
LE_HBa_122_K04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
650 trimmed for vector and quality, 789 raw
Sequence
>LE_HBa0122K04_SP6_57702 (raw untrimmed)
GTTGGATGGGATTGACCACCCAGATAAGTGTGAATCAAATGTTCACAAAAGAGAACCGTTTGAGTAAGATCCAGTAACTTTCAAAAAAATCACCCTCCTT
GTTTGAATGATGCGTAGTGTCATTCGGGGATGAATATTCCTAAGGGGGGATAATGTAACATCCCGAAAATGACTATGCTAAGTTTGACCTAAATGTACTT
AGAATGCATATGTTAGACCGGGTTCACACGGCTTGATGTGCGTGGAACGAGACCCCAGGACCTATGCACCAACCAAGCCGACCAACTTGGTGAGTTTTTT
GAGCTAGGCAGCGTTGGTTCCAAACATGCTAGGTCCCCAAACACTAGGATTCACCCGGGTGAGTCTTAACCAGACTTAGAGGGTAAGTCCTAGGTTTTAA
GGGTTCTAGGGGAGGTGATTTCGAGGCTAGGGGTAGTATAGTAATTACCCTAGGTTGATAATTAAATAATCAAATAAGGTTTTTAATAGTTCAAAATGGG
TCAAAGCTCGGTGGTTAAACCTGAGTTTGACCATATCACCACACTCGGGTTCGAGCCGAGTTGGAGGCATTAAAGTGGGTGATTTAAGTGAATTAAATCA
GACAAAAAATAAGGATGGGAATAATAGTAACTTAACATATAGATTATAATCAGATTTTTACCATTTATATGATGTTGAATAAGTCAACAACCAGCCCCCA
AGAAAAAGAGCGTAAAACTCCAACCTGAAGTGTACTCCATGTACACTCTTTAATTCATTATATATCCCCAAAACTTTTTTTTAGCTTTA
>LE_HBa0122K04_SP6_57702 (trimmed for quality and cloning vector)
AAGTGTGAATCAAATGTTCACAAAAGAGAACCGTTTGAGTAAGATCCAGTAACTTTCAAAAAAATCACCCTCCTTGTTTGAATGATGCGTAGTGTCATTC
GGGGATGAATATTCCTAAGGGGGGATAATGTAACATCCCGAAAATGACTATGCTAAGTTTGACCTAAATGTACTTAGAATGCATATGTTAGACCGGGTTC
ACACGGCTTGATGTGCGTGGAACGAGACCCCAGGACCTATGCACCAACCAAGCCGACCAACTTGGTGAGTTTTTTGAGCTAGGCAGCGTTGGTTCCAAAC
ATGCTAGGTCCCCAAACACTAGGATTCACCCGGGTGAGTCTTAACCAGACTTAGAGGGTAAGTCCTAGGTTTTAAGGGTTCTAGGGGAGGTGATTTCGAG
GCTAGGGGTAGTATAGTAATTACCCTAGGTTGATAATTAAATAATCAAATAAGGTTTTTAATAGTTCAAAATGGGTCAAAGCTCGGTGGTTAAACCTGAG
TTTGACCATATCACCACACTCGGGTTCGAGCCGAGTTGGAGGCATTAAAGTGGGTGATTTAAGTGAATTAAATCAGACAAAAAATAAGGATGGGAATAAT
AGTAACTTAACATATAGATTATAATCAGATTTTTACCATTTATATGATGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.971823
Expected error %
0.371378
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0122K04
Clone
Clone name
hba-122k4
LE_HBa0122K04
C02HBa0122K04
P122K04
Clone type
BAC
Contamination
none
Estimated length
128,477
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found