Clone Read LE_HBa0123M20_T7_58599

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0123M20_T7_58599
Primer
T7
ID from Seq. Facility
LE_HBa_123_M20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1131 raw
Sequence
>LE_HBa0123M20_T7_58599 (raw untrimmed)
TAACTGTCATAACGAAGACGAAGGAGCGGCCACCTCCTCTCTGGANGAGAGGGAGAGACATNANANGGATGGGGCGTGAGAGCTGTGAGATGCCANAGAC
AGCTACCTCATGTGCTCTGAGATCAAGAGAGATGAAGGTNTGTGTNCAGATATGTTGTGTCATTGGCACGAAGAATGTACGAGAACATTAAGTTATTAAT
ATATGTACTATTGTGTGTGTATTCGACGTANCAGAGANGATGANCTATCATTTGTCTCAGTACGTGAGACAACGCCGANAGTAACNTGCTGCACTTGCTA
GAGATATGTATCCTTCTAGCAAGATGTTATGGTTGTGCGTATTCTGTGTGTGAGAGCGTAACTTGAGGCTTACTANACTCCCTCGCTTGCAACCTGCTGA
CAGTAACGTCTGCAGAACACATATATATGTTGAGATCATTCGCGACGAGC
GCCGAACAGTNCGTGACGTAGACCGCGAGCANATGTAGACGCGTATGGGT
TGACGCGTGCCGTTAAGAGTCTAGCTTCTTGAGTCATATGAGCGTTGAGAGTGCTGGCTCTCTTGTGCATAGAACTTGGAGCTAAGTGCATATCGTGTTA
GACAACTCTGCCACAGCAAGCGTCATGGCTCTACGTGGANGTGATCGATNGTTGACAGTGCTGTAGACGTCACTGCTGCTGATCCACATGTTCCTCGGAT
CAGAGATGTTATCGTTGCGGGACTTGGTCCGTCACNCATGGGCGTGCTCGTAGTGCGCGGGTCAGGTTGGTGCCTGATGTGCATGCACTCGTTGCAGATG
TTTGCTGGTGATGCTTACAATGTTCGTNGACTGATGTGATAGTTGAGCAGCAGTACTGTGCTTCATATCGATCTGACGTGGGAGCAGTAGATGGATGATT
GTTTGTTATACATGTCTGTGAGATTGTGAGGTGTGGTTAGAATGATAGACGTTTGCGTGCGATGATACTGGAATGTATGCGTGTTCGCGCTGTGACCTGA
TGTCTAGGATGTATGCTAATGCGGAATGGTGCTCTGACTCTTCTCTTCGGTGAAGAGTCACTCTGTCTGACGTGATGTCGTAGATGTGCCAGTGTAGCCG
TAGTATATACGAGANGACGGACTCTGTACCT
>LE_HBa0123M20_T7_58599 (trimmed for quality and cloning vector)
GC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.944941
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0123M20
Clone
Clone name
hba-123m20
LE_HBa0123M20
P123M20
Clone type
BAC
Contamination
none
Estimated length
108,539
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found