Clone Read LE_HBa0124A03_T7_58757

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0124A03_T7_58757
Primer
T7
ID from Seq. Facility
LE_HBa_124_A03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 821 raw
Sequence
>LE_HBa0124A03_T7_58757 (raw untrimmed)
TCCCACCCGGGTCCCGGGGGGATCCTCTATGAGTCGACCTAGCAGGCTAGCAAGCTTTGAGCAGGTACTACCGCCCCCCTTATGAGCCAGCCCTCTATTA
AGCCATGCAAAGAGAGCCCCCCTTTCATCGTCTCCCTACATAGCGGCAACATCTACCTTTAGATCATCAGGAGTTTGATAGTTTTGAGGAGACTTTTCAG
TGAGCAAATCCAGACACAAGGATCTCCGCTCCCAGATCGCGGAA
ATTCCAGCTTATCTAGGTGGCCTATGAGATGTGATCACTCTCCACACGACCATACC
CTCGTGAACATCATGACCCCCAACCACTAAATACCTTCACAAGTTATAACTTCATAAGGGACGTTAAAAGACAAATACCCACTTCACTATCCACCTACAG
ACATGCTCGTGAACCAAATCTACACAGAGCTCACTCGCATGCATCTCATATTTCGGATTACTAACTTAAATGCTATATCTTCCCCCCCCCCCCCCCATAT
CGTCCTCTACAACACAAAAGAAATACTGTTTAACCNCTGTCCTCATATACTATCTTATCCCACTTTTCCCAATCTCAATCATAATCAACACAACCACTCG
TTCTCTCTTCTTCTCACCTCCTCTCACTTTTAATCCCTCCCCCCATACGCCTTCCCAACCCTTTTATTCGCTAACCCCTGTTCACTCCCTTATTCCCACT
GATCCCTGTCTTATAAGTATCTAACTTGCATCCCGCTAGTGTATTTTTGTCCTAGCGCTCTAGTCTGACTCATACTTGCTGTATTACGGCTTAGATATAC
ATACGATCAAGGACATAATCA
>LE_HBa0124A03_T7_58757 (trimmed for quality and cloning vector)
ATTCC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.619856
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0124A03
Clone
Clone name
hba-124a3
LE_HBa0124A03
P124A03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found