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Clone Read LE_HBa0124H17_T7_59121

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0124H17_T7_59121
Primer
T7
ID from Seq. Facility
LE_HBa_124_H17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 844 raw
Sequence
>LE_HBa0124H17_T7_59121 (raw untrimmed)
TCAAACTCGGGACCCGGGGGGTCCCTCTAGAGTCGACCTNGCAGGCTCGCAAGCTTCATATCTTTAGTCGATAGCTCCATTAAGGCGTCTCGCATCCCAA
NCNACNCNNGAAAGGGCCCTTTTCAGGGGGGCCCCGAAAANGNANCAACANNGCCANNGAGGAAGAACGANGNCNCACGCCCAGGACNACCAACCACNCA
GNAGAANNCNGAGACNNAACAGAAACGANGCCNCAGAACAGAAAANNGNCAAACAAAGAGACAACGAGGCGAGACCCGNCCCACNCAAGACCGCACACAA
GAAAGCAGAACGGAAAGCGAACCACCCACAACGCGAGAGCCACGAAGAGGACCAAACCACCAAAGGAGAGCAAGCCAAACCAGACGAAGCCAAACAGAAG
CACAAACCCAACAAAAACCGCCACCCCCAGCAACCCCGACAAACCCGGGNGAGACACANGAGCAGACGCCGCGCCCCCCGCCCACCAACACCCGCGAACC
CACACAACAGCAAGCCCGCGCANGGCCACCAAACACCCCNAGAAAAACAACAAACGCAGACGAAGAACACACACACCACACACCCACCCACAACCCCGAG
ACACGAGCGCACGACCGCAAGCGGGCCCAGAAACGCGCAACGCCGCCGGCAACGGCGCGGGGCAAGCCACCCGAGAAGCCCGGCGCAGGGCGCCACGACG
GGAGAGACGCGGACAAACCGCGGCAACACGACGCAGCACGCAGACCCACACCCCCGGAACACCGCCCCACCGACAGCCGAAACCAGACAACAGGACAACC
AAGGAAACCGCGAGGAGAGACACAGGAAACGCAGAGAAACACCC
>LE_HBa0124H17_T7_59121 (trimmed for quality and cloning vector)
TTCATATCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.455977
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0124H17
Clone
Clone name
hba-124h17
LE_HBa0124H17
P124H17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found