Clone Read LE_HBa0124N08_T7_59391

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0124N08_T7_59391
Primer
T7
ID from Seq. Facility
LE_HBa_124_N08-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
625 trimmed for vector and quality, 921 raw
Sequence
>LE_HBa0124N08_T7_59391 (raw untrimmed)
CTCAAACCGGGTCCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGTCAAAAATTCTTCTACCCCTTTCAGCCTCATCTTGAACTTTAAG
TCCAAAACCTACTATCTTAAGTAAGATAAAAAGGTATAGAATGGAATAATGATTGTAAAGTAAAATATTGATAGTAAAAAATTAGTATTATTTAAAAAAG
AGATATAAGAAATAAAAAGGANAAAANATAGGTATAGATATATAAATATATATAGGAGGAAATAGATAATGAGTGTTTTTTTTTATNTGTAATATATAAT
AGTAATAATAAATGGAAAAAAAAAAATAAAAAATAAAAGAGGGTTGATTAATAGTAAAATGTTAAGTAAGAATATTAATNGTTTAAGTAGAAAAGAAATA
GTAGTAATGAAAATAAGTTGATTTAANTTGTATTNGAATAAAAGGAAAGTAGAAAAGTAGTAAAGAAGAGTATTTGAATATTTTANTGGAATTTTAATTT
ATTTTTTTAAGAGTAGGAAGAGAGGAATGAGAGAGTGAGGAGTTTAGTTNTTGTGTTGAGAGAGAGAATGAATGAGTTTAGTGTGAGTTGGAAAAATGTG
AGTTTTTTTTAAGATGTGAGAGTAGTGAGAAAAGTTTGTTAGAGAGTTAATGTGAGTGAATGAGTAAGTGAATGTGTTGAGGGTGTTTTTTTTGAATATT
GAATTTATGTATTTGTATTTAATGTATTAGTAGTAGTTAAAGTGTTTAATATAAGTAATTATTGAATTTTTTGTGAAATTAATATGATTGATTTNTAATG
AATTTTAGTTATTTTATTTATTTATTTTTAATTTTTTTATTTTTTTTATTTTTTTTTGTATTGATTATATATTAAAAAATTTATTATAAAATGTGATTAT
ATATATTTAATAGTTGTAAGA
>LE_HBa0124N08_T7_59391 (trimmed for quality and cloning vector)
AGCTTTGTCAAAAATTCTTCTACCCCTTTCAGCCTCATCTTGAACTTTAAGTCCAAAACCTACTATCTTAAGTAAGATAAAAAGGTATAGAATGGAATAA
TGATTGTAAAGTAAAATATTGATAGTAAAAAATTAGTATTATTTAAAAAAGAGATATAAGAAATAAAAAGGANAAAANATAGGTATAGATATATAAATAT
ATATAGGAGGAAATAGATAATGAGTGTTTTTTTTTATNTGTAATATATAATAGTAATAATAAATGGAAAAAAAAAAATAAAAAATAAAAGAGGGTTGATT
AATAGTAAAATGTTAAGTAAGAATATTAATNGTTTAAGTAGAAAAGAAATAGTAGTAATGAAAATAAGTTGATTTAANTTGTATTNGAATAAAAGGAAAG
TAGAAAAGTAGTAAAGAAGAGTATTTGAATATTTTANTGGAATTTTAATTTATTTTTTTAAGAGTAGGAAGAGAGGAATGAGAGAGTGAGGAGTTTAGTT
NTTGTGTTGAGAGAGAGAATGAATGAGTTTAGTGTGAGTTGGAAAAATGTGAGTTTTTTTTAAGATGTGAGAGTAGTGAGAAAAGTTTGTTAGAGAGTTA
ATGTGAGTGAATGAGTAAGTGAATG

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.845388
Expected error %
6.01886
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0124N08
Clone
Clone name
hba-124n8
LE_HBa0124N08
P124N08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found