Clone Read LE_HBa0135K08_SP6_61550

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0135K08_SP6_61550
Primer
SP6
ID from Seq. Facility
LE_HBa_135_K08-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
652 trimmed for vector and quality, 829 raw
Genbank Accession
DU073636
Sequence
>LE_HBa0135K08_SP6_61550 (raw untrimmed)
AGATTACTTACCTAAAGAATCCTAAAATGGTGAAATTTTAAAGTTTTGTGAATGAGGAAATGAGTCCATCGTTGTAGGATCTTTCCTACCAAAGGTTAAT
CCCAAGACCTCTAAGGTAACACATGAAGGAAACCACTAAACACATCCTTCAACTCACACGCAAGAGGTTGCTATACTAAACTTTATCTCAACTACCCAAG
AGTGTCCACCCGAAGACTCTCATTCTTACTAAAATTAGCATAATTCATTCACTTAAAGTGTGTGTGTGTGTATATGTAAGAACACCTTGTATATAAGCAT
CATTTCATATACATTACTTTTAAACATACTTTATAATTCCATTTAACAACTTAGTCACTCTACATACTTAACGTAGTCACATTCTTCAATTAGACTAAAA
CCGAGGTCAAACATATCATTTAAGCTTCAAAATCCCAAAACAAGACCCAATTTCAATTTCTATTCATTCTACGATTTGAACCTTCAAGATCACATTCTCA
ATACATAATAAACACCACCAATGAACCAAATTAGCACCGCCACCAATAAGGTTTACCATACAACTCAAGAACAATTTATCATAGGCATAAATCCCTTATG
GAAGTAGCTTAATCATCATGACAACACAATAAGATTAATGTTCAATTTATACATAAACATGCTCATTTGATCCTTTTCATAAATCATAATTTGAAAAAGA
AATTTTAACATGATTTTCACCAAGGTTTAAACATTATTATTCACCAAATAACTTTGTTTACCTCATTAAATTAACTTTTAAAACCGTTTTCTTGTAAGAC
CCATAACCGGGTTAAAGAATAAATAAGAA
>LE_HBa0135K08_SP6_61550 (trimmed for quality and cloning vector)
AGAATCCTAAAATGGTGAAATTTTAAAGTTTTGTGAATGAGGAAATGAGTCCATCGTTGTAGGATCTTTCCTACCAAAGGTTAATCCCAAGACCTCTAAG
GTAACACATGAAGGAAACCACTAAACACATCCTTCAACTCACACGCAAGAGGTTGCTATACTAAACTTTATCTCAACTACCCAAGAGTGTCCACCCGAAG
ACTCTCATTCTTACTAAAATTAGCATAATTCATTCACTTAAAGTGTGTGTGTGTGTATATGTAAGAACACCTTGTATATAAGCATCATTTCATATACATT
ACTTTTAAACATACTTTATAATTCCATTTAACAACTTAGTCACTCTACATACTTAACGTAGTCACATTCTTCAATTAGACTAAAACCGAGGTCAAACATA
TCATTTAAGCTTCAAAATCCCAAAACAAGACCCAATTTCAATTTCTATTCATTCTACGATTTGAACCTTCAAGATCACATTCTCAATACATAATAAACAC
CACCAATGAACCAAATTAGCACCGCCACCAATAAGGTTTACCATACAACTCAAGAACAATTTATCATAGGCATAAATCCCTTATGGAAGTAGCTTAATCA
TCATGACAACACAATAAGATTAATGTTCAATTTATACATAAACATGCTCATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.931698
Expected error %
0.373502
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0135K08
Clone
Clone name
hba-135k8
LE_HBa0135K08
C12HBa0135K08
P135K08
Clone type
BAC
Contamination
none
Estimated length
79,449
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found