Clone Read LE_HBa0042G04_SP6_62886

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0042G04_SP6_62886
Primer
SP6
ID from Seq. Facility
LE_HBa_042_G04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
625 trimmed for vector and quality, 794 raw
Sequence
>LE_HBa0042G04_SP6_62886 (raw untrimmed)
GATTTGGGGAATTTATGTATTTTCCCTTTAAAAAACAATAATGTCATTTTATCGAATAGAAGATGGACAACTCGACGTTATTATAAAACTAAGTTCCAAC
ATCTTTAGTCCTAATCATATTATTTGGCTAAAAGCTTTAGCAAATATAACTTATTTTAGAATTTAAAAAGATAAAAAAAGATTTATTAATTTTTTCATGA
TCAATCATCATTATTTTTTTTAGGAAAAAGGGTCCCATATACCCCTCAACTTTGTCATTTGAGGCTGATATACCCCCTCGTTATAAAAGTGGCTCATATA
TGCCCTTACCGTTATATAAACGGCTCACATATACCCCTGACGTTACAAAATGGCTCACATATACCCTTCATTTAACAGAAGTTAAAAAATTAGTTTTTAA
ATTTACATTTATTACTTCTTATTTTTAAAAAAATTATTTAGTGGTATATATGATTCTTCTATCAAAGTTCAAGGTATATTTTAATTTTTTTCATACATAA
ATTATTTTTTGACTTCTTTTATTATAACTATTTGAGTTTCTTATTCTTATTTTCTTTTTTACTTTCATTCCTTAGTTTAAAGAAAAAAATTAACCTATTT
TTTGTGTGTGTATTGTAATTTGATTTCGTATTCAAAGAAAATAAATTAGTCTTTTTTTTTTTTTTTATTTTTTTTTTTTTGTATTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTGATTCATGTCCCTCAAAAATATTCAAAAAATTATTGTTGGCCTAGGAATGAATATTACTCCTTAGTGGGA
>LE_HBa0042G04_SP6_62886 (trimmed for quality and cloning vector)
ATGTATTTTCCCTTTAAAAAACAATAATGTCATTTTATCGAATAGAAGATGGACAACTCGACGTTATTATAAAACTAAGTTCCAACATCTTTAGTCCTAA
TCATATTATTTGGCTAAAAGCTTTAGCAAATATAACTTATTTTAGAATTTAAAAAGATAAAAAAAGATTTATTAATTTTTTCATGATCAATCATCATTAT
TTTTTTTAGGAAAAAGGGTCCCATATACCCCTCAACTTTGTCATTTGAGGCTGATATACCCCCTCGTTATAAAAGTGGCTCATATATGCCCTTACCGTTA
TATAAACGGCTCACATATACCCCTGACGTTACAAAATGGCTCACATATACCCTTCATTTAACAGAAGTTAAAAAATTAGTTTTTAAATTTACATTTATTA
CTTCTTATTTTTAAAAAAATTATTTAGTGGTATATATGATTCTTCTATCAAAGTTCAAGGTATATTTTAATTTTTTTCATACATAAATTATTTTTTGACT
TCTTTTATTATAACTATTTGAGTTTCTTATTCTTATTTTCTTTTTTACTTTCATTCCTTAGTTTAAAGAAAAAAATTAACCTATTTTTTGTGTGTGTATT
GTAATTTGATTTCGTATTCAAAGAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.891113
Expected error %
0.253991
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0042G04
Clone
Clone name
hba-42g4
LE_HBa0042G04
C02HBa0042G04
P042G04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found