Clone Read LE_HBa0048J04_SP6_63798

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0048J04_SP6_63798
Primer
SP6
ID from Seq. Facility
LE_HBa_048_J04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
435 trimmed for vector and quality, 871 raw
Genbank Accession
DU071969
Sequence
>LE_HBa0048J04_SP6_63798 (raw untrimmed)
CCGGTTCTTTCTCCGCGCTCCCAATTTACTTATTTTAGAATTTAAAAGATAAAAAAAGATTTATTAATTTTTTCATGATCAATCCCCTTTATTTTTTTTA
GGAAAAAGGGTCTGATATACCCCTCCCCTTTGTCATTTGAGGCTGATATACCCCCTCGTTATAAAAGTGGCTCATATATGCCCTTACCGTTATATAAACG
GCTCACATATACCCCTGACGTTACAAAATGGCTCACATATACCCTTCATTTAACAGAAGTTAAAAAATTAGTTTTTAAATTTACATTTATTACTTCTTAT
TTTTAAAAAAATTATTTAGTGGTATATATGATTCTTCTATCAAAGTTCAAGGTATATTTTAATTTTTTTCATACATAAATTATTTTTTGACTTCTTTTAT
TATAACTATTTGAGTTTCTTATTCATATTTTCTTTTTTACCTTCATTCCTTTATTTAAAGAAAAAAATTAACCTATTTTTTGTGTGTGTATTGTAATTTT
TTTTCGTATTCTAATAGAACGAATTATTCTTCTCACGACAAGATTTACATTGACTTTAGTGAATCTTCCATAACTTTGGTTTTCAAAATAATAATTATCT
TTTTAGTTTTTGATTCATAAAAATATTATTATATTTTTTACTTGCTTAGAATTAAATTTGTTCTTGTGTTATTATTACTTCATGGAAATAATCACCTATA
ATTTTTATTAGAAACCTTTCTAATTCTTTTTTTTTCTTCTTATGATCAATTCCTCAATGACGTCCTCATTTACAGTAGAAGAATGACGATACTCTATCCA
AATCTATTTCTTCATTTTTTTAAATTATGAAGTAAACTACTCTATCATTTTCTAACTTTTAATTTTATAAA
>LE_HBa0048J04_SP6_63798 (trimmed for quality and cloning vector)
AAGATAAAAAAAGATTTATTAATTTTTTCATGATCAATCCCCTTTATTTTTTTTAGGAAAAAGGGTCTGATATACCCCTCCCCTTTGTCATTTGAGGCTG
ATATACCCCCTCGTTATAAAAGTGGCTCATATATGCCCTTACCGTTATATAAACGGCTCACATATACCCCTGACGTTACAAAATGGCTCACATATACCCT
TCATTTAACAGAAGTTAAAAAATTAGTTTTTAAATTTACATTTATTACTTCTTATTTTTAAAAAAATTATTTAGTGGTATATATGATTCTTCTATCAAAG
TTCAAGGTATATTTTAATTTTTTTCATACATAAATTATTTTTTGACTTCTTTTATTATAACTATTTGAGTTTCTTATTCATATTTTCTTTTTTACCTTCA
TTCCTTTATTTAAAGAAAAAAATTAACCTATTTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.868466
Expected error %
0.470825
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0048J04
Clone
Clone name
hba-48j4
LE_HBa0048J04
C02HBa0048J04
P048J04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found