Clone Read LE_HBa0048O11_SP6_64052

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0048O11_SP6_64052
Primer
SP6
ID from Seq. Facility
LE_HBa_048_O11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
146 trimmed for vector and quality, 869 raw
Sequence
>LE_HBa0048O11_SP6_64052 (raw untrimmed)
TATTTTGCCTGATATTTTCTACCGTAGGGTCCGACAAGTGAACCAATTCCCTTAAAGCTTCTCTTGATGCAAGGGCACCGTTTTAAGGGCTATTATTTGT
AAAAATTCAGTCTGCTAGTGATCTTTTTCACTCTTTACCTAGATTTGCACGACTTTGAAATATGTCTCTAGTTGGTAAGGTATGCTTACTTATGTACTCA
ACATCTCTCATATACTTTATTGATGTGAGACTTTAGTCTTAAACTGAGCGTCTTTTTCTCCTCCTCTATGAACTTAGCATGCTCGTTGAGGGTTTCTCAA
CCCTATGAGATTTGCCTATACTTATCACTGAGGTATGCCCTATGTTATCGATATTTGCTTAAATTCATTTGAACTTGCGTCACATCGACTAGGCGAAAAT
ATGAGTGATTCTAATTTTATATACATTTATAATGGCCCATCCTGCTAGTGCTATTGTCTCTTTGAGTCTATGGTTCACACAACTTTAAAATGTGTCATTT
AGTTGATTAGGTTTGTTTATTTATTTAGTATAGACATCTATTTTCCTTTTTGTTGTTCCGAATTTTTTATAAATCACTTCTCTTTGTATTTGCCCTTTTC
CCTCCCTAAATAATTATGAACCGGTTTACATTTTCCCAATTCTTTATTATCCCCATAGTTTTAATATATTTTGATTTGTCATTTTAATTTATTTATATTA
TATATGTAGTTTTTAGCTTATTGCTGTTTCTCTTTATTTTTGTATCATTTTTCTTATTGTTATAGTCTTGTTTATCTCTAATTTATTTTCTTATCTTGTC
TGTCCCTTTTATTTCTCTTTCTTTCAACTTTTATCTTTCCTTCCTATTTCTTGTTTCTGCATGCTCTAC
>LE_HBa0048O11_SP6_64052 (trimmed for quality and cloning vector)
TTGTAAAAATTCAGTCTGCTAGTGATCTTTTTCACTCTTTACCTAGATTTGCACGACTTTGAAATATGTCTCTAGTTGGTAAGGTATGCTTACTTATGTA
CTCAACATCTCTCATATACTTTATTGATGTGAGACTTTAGTCTTAA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.888123
Expected error %
2.26424
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0048O11
Clone
Clone name
hba-48o11
LE_HBa0048O11
P048O11
Clone type
BAC
Contamination
none
Estimated length
115,089
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found