Clone Read LE_HBa0033A13_SP6_6552

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0033A13_SP6_6552
Primer
SP6
ID from Seq. Facility
LE_HBa_033_A13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
695 trimmed for vector and quality, 929 raw
Genbank Accession
Sequence
>LE_HBa0033A13_SP6_6552 (raw untrimmed)
GGGGGTAAGTTTTCGAAGATTGGTTGCATGGGTGCGCCGGGATGGCGGTCTCCTCCACATAGTCGTGAGGGGGAGAATTGTTGGGTTATGGACCTTTTTC
CCTTCCTATGTGGATAAATAAAAGTCCAATTTGGACCAACCCATTTTTGCCCATAGGCCCATTCTTATGAGGCAAATATAAGCCTATTTAGGTCTTATTT
TCAAATACACAGAGAGTTTTTTCAGCAGCCAAAAAGAGAGAAAAAGAGCAGTTTTTCGCAGTCAAAATTCAGCCCTAACAGCCAACTTCAAATTGCGATT
CCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGTATATTATATTCATCTCAATCTTTGATTAGAAACTGACAGAGTTGGATTTGGTGGCCTG
AAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAATCTTATTTTGTTGTTGCTCGTT
GTTTGGCACTTGTTTTATGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTTATTATAGTGGAGCTTTTGGTCCTGTGATTTTTTACTCTTCACATCG
AAGGGTTTTCCACGTAAATCTTGGTGTCTTGTGAGATTGGTTTATTATTGTCTTGTTATATTTGTTTGGTTGAATTACTTGCTGCCTTACTATCATATTG
CTTGTGGTTGTTTGTATTCTCTTGGTTCAAATCGAGAAGGGAAAGTATAGACTTGGGTATTCTTCCGTTGTTACCTGTCAACATTCTTTGTTATGTCTTT
GGCTTCCCAACCCTGTACCTAAGGGGAAAAAAAAAATTCCAGGGATCGAAATGAAAGTTGATACAGAAGAGAACTACTCCCAATTGTAGGTCTGAAGATG
TTCAATGTGCCCTCAGTTGAACAAACCCG
>LE_HBa0033A13_SP6_6552 (trimmed for quality and cloning vector)
CGCCGGGATGGCGGTCTCCTCCACATAGTCGTGAGGGGGAGAATTGTTGGGTTATGGACCTTTTTCCCTTCCTATGTGGATAAATAAAAGTCCAATTTGG
ACCAACCCATTTTTGCCCATAGGCCCATTCTTATGAGGCAAATATAAGCCTATTTAGGTCTTATTTTCAAATACACAGAGAGTTTTTTCAGCAGCCAAAA
AGAGAGAAAAAGAGCAGTTTTTCGCAGTCAAAATTCAGCCCTAACAGCCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTT
TGGACAGTATATTATATTCATCTCAATCTTTGATTAGAAACTGACAGAGTTGGATTTGGTGGCCTGAAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGC
GAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAATCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTGTTTTATGGCCAATTTTGGAGAA
CAATATTGTAACTCTTGGTTATTATAGTGGAGCTTTTGGTCCTGTGATTTTTTACTCTTCACATCGAAGGGTTTTCCACGTAAATCTTGGTGTCTTGTGA
GATTGGTTTATTATTGTCTTGTTATATTTGTTTGGTTGAATTACTTGCTGCCTTACTATCATATTGCTTGTGGTTGTTTGTATTCTCTTGGTTCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.955948
Expected error %
0.0431243
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0033A13
Clone
Clone name
hba-33a13
LE_HBa0033A13
C12HBa0033A13
P033A13
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found