Clone Read LE_HBa0186C23_SP6_65804

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0186C23_SP6_65804
Primer
SP6
ID from Seq. Facility
LE_HBa_186_C23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 968 raw
Sequence
>LE_HBa0186C23_SP6_65804 (raw untrimmed)
CGCGATCTTTACTATTGTTTGGATTTTTTTCATTTTGTAGTAACTAACTTTATCAGAACAAAATCACGCCGGCTAATATATGTTATTACCACTTGATATA
TGCTCTATGGAATAACCCGAGGTCTATAATAAATGGTCATCTATATCGGTTCAGTACTATGATATCACTCTGAAGTTTGTGACCATAAAAAGGCTTTGTT
TAAAGTTATATA
AAATTTTACTCGTTCTGGGGGAGGTGGGGGGGGGAATAACGGAAACACACACCATCAACCCCCCTTATAACTATTACCTGCTGCAATG
TACACAGTGAACTCTCCCCTACCCCACGCTCTCTCTTGCATAAGCACACTCTGCATGTCGTGATGTATACACCTACTTTTACTGTGCATGGCTCCTCTCT
GATGGCTGCGAGAATCCTAGCCCTCAACTTCTTCGTTCAATCANCCTCTTATNCTCCCAAACATTCACCATCATACAAAACTCCCCACCTCTATTCACTC
CTCACTGCACACTCTTTGCCCCACCNAATCTCTATTCTCTCCCTCCACCTCTCCCTCTTCACCTAATATCCTCTATATAACACATACCTCATGCTTATTT
ATGCTCCCGATCATATTTTCACTTATATATCCTCTCATACCCACATCACAACATGAATCGACTACCATTTAATCACACTCCCTCTACAACGCTCTACTCG
CTTCTCTTACTTCTCCCACCTTATCTGCTCTCGTTCTTCCTCACCACTCTCGATTACCCTCCTCTCTTCATATTCCACCTCATCCTCTCACTGAATTACT
CATTATTATATACANATCTCTTACAACTTCTCAGCTCTCGCCTTTTTTCCTCCACATCCTCTCCTCTCCTCATTTACGCCCAACCGCTACGACTAACTCT
CTACTCATCTAACCAACACGCGATACCANTCGATTCCCATCAATCTTGAACTTTNCTTATTATTGCTT
>LE_HBa0186C23_SP6_65804 (trimmed for quality and cloning vector)
AAATTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.281626
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0186C23
Clone
Clone name
hba-186c23
LE_HBa0186C23
P186C23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found