Clone Read LE_HBa0068A12_T7_66455

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0068A12_T7_66455
Primer
T7
ID from Seq. Facility
LE_HBa_068_A12-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1138 raw
Sequence
>LE_HBa0068A12_T7_66455 (raw untrimmed)
GGAGGTCTGCCTGGTTGTGCANCGCGCGAGCTCNGCAGTTTAANTACAGGAGGCGGCTCCCCCCCCCCTCCCCGAACACAGATCTCCGAGCACACCTCTN
TCAGATTCGAATTTCAGATCAGCATTAATACGACGAGATATCCGCGTGCGACTATGACTCTACCAGCGATTCACAACCNGGATCAGGCTTTCTATTGCTG
ACGCTGATTGTCCTACTCGCTGCTTATGTGGACTAATCGCAGGCCCATCGTGTNAGCGAGTGTGAGGTGGATTGAGACTAGAGTGAATCTATAGCACCAA
TTATCAGGGCATTCAGACATAGTAGTGTCGTTGGCTCANATACNTGTTAGCTGAGCATCAGCCCACACNNGTNTGATACGATACTCCACGCAGAGAANTG
GCGCATTCGTCACGTCGGGTCGTCGGTCATNGCATGCAAGGCGATGCTACTGAATATTGATATGTCTTNCTTGTCTTTGGAGAGATGACGCTCGACACTN
TCAGTACACATTGGCGCAACGTCGCTGCACGAAGTGNAGCGGAGCGATAGTGCAGGTNCGTAGATGACGCTCTGTCGCCTGAATCATCCGCTGTTAGGTC
TCTACCTCTATTGTTATTGTGGAGAGGCGGCGTCATACGAATGTTCTTGCTTCATTACTCTGCACCCATCCGACNCGCGTGANCATGACCACGTCGGTGC
GGCCCGCGCCTTATTATCGTGCTGCTAATAATGCTCGCGTGACCCGCACAGAAGATCACTATATGAGCGCGACTCTCACGACTCGCCNCTCTCAATCGCC
CCGCCTCAGGCGTTGTTGCGTCTGTTGTAGGGGCACGGATGTTGACGTCTCGCGCTGCAACGCATCTCGACGTGCAATGTGTGTGCATGAGTATCGTGCG
TGCTTGCTCTTCTGGGTACTCGCCAGAGTGTACGGGAGTTCAAT
CACGTACGACTATATATTTTGATCTTGCTACTTCTTCTACGTTTTCGAGATACTCT
CGTCGCTCTCATCGATCTCTTTATTTGATTGCTGGCTGTAAGGGAATAGAGCGAAAGCCACTTACACCCACACTAAAGTACATGAGCCGCCTGCAGTGTC
TCGACGTTACACACATATATACCTAGACGCTACAAAAT
>LE_HBa0068A12_T7_66455 (trimmed for quality and cloning vector)
CA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.66405
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0068A12
Clone
Clone name
hba-68a12
LE_HBa0068A12
P068A12
Clone type
BAC
Contamination
none
Estimated length
114,561
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found