Clone Read LE_HBa0033D23_SP6_6716

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0033D23_SP6_6716
Primer
SP6
ID from Seq. Facility
LE_HBa_033_D23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 919 raw
Sequence
>LE_HBa0033D23_SP6_6716 (raw untrimmed)
TTTGGTACAAGTACTGTCCGTAGGTATATGAATTGGGACCCATTCATAGATCACAGCCATTCGTGATCTTCCCCCACCTAAAAGCATGTAAGGAAGTAAT
GAG
TTTCTTAGGGCGACTTCACTACATCAATCGTTCTCATTGCTCAGTCTACTGCTCTTCTGTGAACCTTTCTTGCTGCTATTTAATAGCGATGCTGGAT
TTGTAAATGGACAAGTGAATGTCATCAGGAATTTGACACGATCCAAGATTATCGATCTCTATCCTCCTGTATTTGGTGCCACCATATTCAGGTACATCTC
ATTACTTTTGTATATTATACTTTTGGATAATGTCTTTCTGTATAGCATCTTGTGACCACACCATGAGTCGTGGAGGAAGGATCAAGCACTATATTATATG
AGCAATAGTTTCACATCATGCGAGACCCGAGTCTCTCTCTGATAGCTTACCTGTTGTGCTCTATGTTGGGTTGCCCATATGTTACGACATTACCTCTCAT
CACATACTACGTCTCTGATTTCGAGGATGGATCCTTTGATATATATCTTTCATGAGCCGTAGGACGCCAAGTCATCTGTGTATTTGGCAGATGATTGTTG
AGCGAGTTTGACATAGTGTCTGTCTCGCATATAGCAGAGAAATCTCAGGCATTATCCTATCATATGGCAGATAATCACGTGTACTATGATTACTGACCGC
TGATCACCTACTCTCCTTATGATGATGTGGCTTTTGTGGGAGATGACATTACTGAGAATATTATGGATGGATATGTACTACGATTGATCTAATGATTAAT
ATGTTGCCGCATTTTTGCTTCTCTATCACTCCATGTGAGCATTTTTTCCCAATCAACATAATTATATCCTTTGCTCTATATTTGTTTTAATTCACACCTG
TTTCTTTTCATCGACTGGA
>LE_HBa0033D23_SP6_6716 (trimmed for quality and cloning vector)
TTTCTTAGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.264811
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0033D23
Clone
Clone name
hba-33d23
LE_HBa0033D23
P033D23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found