Clone Read LE_HBa0105P09_T7_68705

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0105P09_T7_68705
Primer
T7
ID from Seq. Facility
LE_HBa_105_P09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1144 raw
Sequence
>LE_HBa0105P09_T7_68705 (raw untrimmed)
TTTTCACATTTGTGGTCCCCGGGGTGTATCCTACTAGGANGTACGACTCTTGCAGAGCATAGCAANGCTTTTGCTTAGANCTATTAGTTGTTCCTTCACT
GAGTTAGTTGATAGATTCGAACTTACCATGATGTANGATCGAATCAATGAATTGACTCTTGGATAGTTAGATAGAATCATGGACTGTAAGACTATGAGTA
CGACGGATAGATGAGTTCGTTTGCGGTAGTGAGTGAGTAAAGGTATGTCGAGTTGTGAAGATATTAGAAGTACTTTAGTTCGATCGATGGTTCATAGATG
ATACTTCGAGTGTATATATATATGTACTATTGTGTTATATGTTAGTTTATAGTTGATCTAATGTTGACGTCATCGTGTTGTTCTCGAAATGAGCTGAGAG
GTGATATCGCAATATATGGGATGATAATATCTTAATGATAATGTGTAATAGTTCATCTGATTCACTATATACAATCTCGATATATCGCGGTGATAATCGT
ATCCCGCATGAGNACTACTTGATTCGTTAGATTNAATATACACACCTGTTACATCATGATACATACGGTGAGCTTACTAAAAGCTTGTTAATTTCCGATC
TTGTACTGAACTCTGCATATCATCATCTATNCATTTATATCTAAATATGTCTNATCTAATACTGAGATTCGGCAA
TTACACTAANGAATATGTATCTGAC
GAATCGAGCTCGTCGAGTAAGCTTACTTTGTGTGTACTTGGATTGTAATATTATCACCTCATAACATTGCATACGAAGTTATTTCTATCCATTACCTTCT
CTACTTTATATTATTATGGTCATCGTGGGACTTCGTGATCGTATTTGTTGTATTTATCTTCACTCTATATCACACTAATCGCGTTCTTGGCATATATATG
ACATCANTCTCTTGCAGGTATACTATACTGTTGCTCTCTGCTGTCTCCGACATATGCTTTCATCAATTCTCCCTCTCCTCTTCTATCTCTTACTCCGTCT
ATACTTTTATCCCTGTTTCGTTTCTCTCTACTATTGACTACCCTTCTCATGTTTAGTGTGTCATCTGTCAATCATACTACGTCCCCGCCTCCTTCCAGCT
CTCTCACTTCACCCTATATGTTTTTACTCAATCTACCTCTGGAT
>LE_HBa0105P09_T7_68705 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.23403
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0105P09
Clone
Clone name
hba-105p9
LE_HBa0105P09
P105P09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found