Clone Read LE_HBa0136B10_SP6_69570

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0136B10_SP6_69570
Primer
SP6
ID from Seq. Facility
LE_HBa_136_B10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1099 raw
Sequence
>LE_HBa0136B10_SP6_69570 (raw untrimmed)
CTTACTGGATAGCAGTATAAATCGGCCGTCGTGTGAAGTCTTGATTTAAGAAGGATAAGATGTGTTACTGATCAGGTNCTAACATCCGTGAGGTATGGAC
CACCTCCCCTCGCGTAGGATCGACCCTCTCTTTTTATGAGGTGATGGTAAATAGTAGAGAGTAGAAGCGATATGTGAGAACATTTTCATGGTGAGATGCG
GAGATCTATCTACGTAGTTAGTCTTCCCGGTATGAGCCTGTATAGTATATCTGGAGTAAGATATACTATGTCTATTATTTATGATTTCTGTGGTTTAGTT
CTTAAGTCATGGTTGGTGATTGGTATGGTGTAGGATTATGCTGGACTCGCGGCTACTCTGATGACTGAATGGTTTTGTGGCTGAGGCGCCTNCTATGTTA
CTGTGGTGGATGGGAGCTGGTCTAGACCCTTAGTACCTTTATGGTGTTGTATGTAGTTTGTATTTTTGGTGTTTGACTCTTGTGGGTGGGTGCAGCGGGA
GGGGTTCTACGAGATGTGTACCCGGGGTCGGTGGTACGCGCGGAGCCGCGTCTGCTATACCGTGTTGGTGGCCTGCGTTAATTATGACTGCTTTTGCTGT
GATTGTAGATAAGGTGTTGTCAGATATGTAGTGTATTTTGTGCGATATGTGTCGTACTATTAGTGTAAGGCATTGTCTGGTTACGTGCTCATTTAACTAG
GTTGGTGTGGCTTATTTATATATTATATTCATTGCGGATGTGTGCAGTTCTGTTCTATTAATATTCCATGTGCATGATCGATTTCATTTCCTGCGGCTAG
TATGGTATTTCNTGTCCTCTTAACGATTTTATTATAGTTACATTTGTGTTAATACAATGTTATGTTTCAGAACACTTAATGGTCTATGTTCAGCGTCGCG
ATACATAAATACATAGGCCATTCTTTCCTATCAGGGTCTAGTGGGCTTGTCTTGTAGATAAGCACAGCAGGCTGTATTATTTCTTTTACTATCCCACGTT
ATTTTTGATGTTTGAGATGATATATATTAATGTTATTTAATTTACTATACTGTGATAGGATATTGCGCTTGACCGACAGGCTGATGGGTTGACGCATGC
>LE_HBa0136B10_SP6_69570 (trimmed for quality and cloning vector)
AG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.455
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0136B10
Clone
Clone name
hba-136b10
LE_HBa0136B10
C03HBa0136B10
P136B10
Clone type
BAC
Contamination
none
Estimated length
116,368
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found