Clone Read LE_HBa0136M02_T7_70083

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0136M02_T7_70083
Primer
T7
ID from Seq. Facility
LE_HBa_136_M02-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
31 trimmed for vector and quality, 747 raw
Sequence
>LE_HBa0136M02_T7_70083 (raw untrimmed)
TTTTTTTTTACTTGTTTTAAGAAAAATGAGATCCATAAGGACTCTCTTTTTGGCCTCGCACATTTGACGCTTTATAGCATAAGTTTAGCTGCGGGACTCA
TAGAAACTACAGCTATTCGATGATTTATTTGGCTGTTATTAGGTATTGTT
TTATCAACTTTTACCACAGATAATGAGAATTACCTTTTTTTTATGCTCAG
AATGCAGAGTTTTGAGAAAGTATGCCTTTCATTTGATTATCATGTTTAGATCGCTTGCTGACTGCATCAAACAATAATCAGATTATTATTCTTTGATTAT
CTAAATCTGTCGTCTCAAATACATGGAAACGGAAAACTCCTAGAAATAGTTTGGAGTAATTCTAACATTAAAGTAGATGCGTATTAAAATATTATACATT
TCTTAGTTACCCTTTTACCTCGAGGTAAACCTCTGCAACACTAGTAATAGGGAGGAAAGGGTCCCACCCCTCATAGGCAAACTATATCGCGTTCTTTGGG
TAGCGGTTGGTTTGATCCCTACATTTTGTGATCGTAACCCGATCATATCACCGGCTGCGGTTGATCCTCGATTATCCTCGCTCCTCCTCTGGTATCCTGT
GTCCGTCTTTCTTCCTCTTGGTGTGTGCTTCTTCTTCTCTGTCTGTTATCCGTTACTTCTTCTCTCTCCATCCGTCCATTTCCATCCTGTCACTAATGGA
TCTTTCCGATGCATGGCCCTCGCAAACAGCCAAGCGGGAAGGGTTGT
>LE_HBa0136M02_T7_70083 (trimmed for quality and cloning vector)
TTATCAACTTTTACCACAGATAATGAGAATT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.782394
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0136M02
Clone
Clone name
hba-136m2
LE_HBa0136M02
P136M02
Clone type
BAC
Contamination
none
Estimated length
74,040
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found