Clone Read LE_HBa0033K21_SP6_7048

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0033K21_SP6_7048
Primer
SP6
ID from Seq. Facility
LE_HBa_033_K21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
845 trimmed for vector and quality, 955 raw
Genbank Accession
Sequence
>LE_HBa0033K21_SP6_7048 (raw untrimmed)
AATCCATAAAGGTAATCGTNGCATGTTCGGCCCCAGTATCCAACAGCCATTCAGAGGAAGGGCCGGCTTGAGATGCATAATTGGCACGGTTATCACTATT
TCGGCTCTCCTCATACCGAAACCAGCAACGAACAGCGGTTTGTCCTGTTTTCTGACTGGCACGGTTATCACTATTATCACTAACTATTCTTGAATCAGAT
TTGGAGAAATTGCCCTGATTGGGTTTTGTCATGATGATCAAATGGCTACAACCAATTCCGCAAGAATGTTGGAAAGAAATGAAAACCTTGATAGTATTCG
AGAAATATGTTAAAACAAAAACGTCATATTTGTTGTTTCAAAAAATTCACTATTTTTTTTTATTTGTATCTTAAGGGAGGAGAAACTTACTCTAAACTAT
CATGTATATGAGTTTCTTACATGAAGTATCACCATCAATTCACGTAAAGAAGTAAACTATTGATGGTTGACGTGTGTTTTAATAAATATTTTTTAATGAT
AATGTATTGAACTTTTCCAATTTACTGAAAAGATCTAAAAAAAGTATTCTCTAAAAATCATTATCACCACAAAACATAAAATTCTTCATACGTTGAAACA
AGATCTTTTTTTGTAATAGGTTCAATTTTTCTTTTCTGGGTACAATTGATTGAGTATTATTTAAATTGTGGTATATATAGTGATAAATGGATCAAAGTTT
ATTTTTAGTTAATTTGTGTTGTTGATTGAATGAACTAAGAAGAAAAAACTCAGTCTGAAGCAATAGAAATACTTGTCCAAATATTTTTTTCATGTTGAGA
AGAGACTTAATAAGTTAGTAAGAATTTTTTACATGAATAATAAGTTGCCATTGATAATTGTTTAGATCTAAAGGTGTATGTGAGTTGCTTAATGGTGTCG
CTGGAAAAGGGAAGTGAAAATAATGTTCAAAAAAGCTGTTTTTTTCTTTTTTTGA
>LE_HBa0033K21_SP6_7048 (trimmed for quality and cloning vector)
GGCCCCAGTATCCAACAGCCATTCAGAGGAAGGGCCGGCTTGAGATGCATAATTGGCACGGTTATCACTATTTCGGCTCTCCTCATACCGAAACCAGCAA
CGAACAGCGGTTTGTCCTGTTTTCTGACTGGCACGGTTATCACTATTATCACTAACTATTCTTGAATCAGATTTGGAGAAATTGCCCTGATTGGGTTTTG
TCATGATGATCAAATGGCTACAACCAATTCCGCAAGAATGTTGGAAAGAAATGAAAACCTTGATAGTATTCGAGAAATATGTTAAAACAAAAACGTCATA
TTTGTTGTTTCAAAAAATTCACTATTTTTTTTTATTTGTATCTTAAGGGAGGAGAAACTTACTCTAAACTATCATGTATATGAGTTTCTTACATGAAGTA
TCACCATCAATTCACGTAAAGAAGTAAACTATTGATGGTTGACGTGTGTTTTAATAAATATTTTTTAATGATAATGTATTGAACTTTTCCAATTTACTGA
AAAGATCTAAAAAAAGTATTCTCTAAAAATCATTATCACCACAAAACATAAAATTCTTCATACGTTGAAACAAGATCTTTTTTTGTAATAGGTTCAATTT
TTCTTTTCTGGGTACAATTGATTGAGTATTATTTAAATTGTGGTATATATAGTGATAAATGGATCAAAGTTTATTTTTAGTTAATTTGTGTTGTTGATTG
AATGAACTAAGAAGAAAAAACTCAGTCTGAAGCAATAGAAATACTTGTCCAAATATTTTTTTCATGTTGAGAAGAGACTTAATAAGTTAGTAAGAATTTT
TTACATGAATAATAAGTTGCCATTGATAATTGTTTAGATCTAAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.931374
Expected error %
0.404424
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0033K21
Clone
Clone name
hba-33k21
LE_HBa0033K21
P033K21
Clone type
BAC
Contamination
none
Estimated length
109,766
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found