Clone Read LE_HBa0138L01_T7_70801

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0138L01_T7_70801
Primer
T7
ID from Seq. Facility
LE_HBa_138_L01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 928 raw
Sequence
>LE_HBa0138L01_T7_70801 (raw untrimmed)
ATTTGTCTGAGCACTTAGTTTCGATACTCCCTCTTTCAATGATACATCGTTTTGTGGAGCTTATTACAAAAATAGCCCGTGGTGTGAGTATGCGCAACCA
CAAATAGCTTATGGTGATACATAGGTACGATGACTTGAA
AGGACAGTTCCACGTGAGGAATTAGTGGTTTCATATATAACCAGAGCCTCGCGACGGTTTT
TGGTTTCATAATAATTTTGCTATCTTGTACCTGGTTGTGAAGGTGTATTGGGTGATAAAGTATGTATTTTCTTGTTTGATTACAAAGTAATGCCATGGTT
TAATTAATACAATCTAGTATATTTTTATTGTTTTTTTGTTTTTTGTTTTTATTTATTTAGTATTGTGATCGAATAACCTAATAAAATAAAAATGTCTTGG
GGAAGGCTAATCGAGATATGATTGATGTGATGTATTCGGCTATTGCCAGTATGTTTAGTTAGTACAGTGTCGATATACTTCACGGCGTAGAGAGATAGTA
ACTGCAACTGGTTGCCTCAGGTATACAGTATATGAGATACTGAGTTAGAACAGACGGCGCGGATCCACGTAGAATGGACTCACTGGAGGCGATAAATATG
AGATTTACTACGTAATCTGCATCGATATGAACGAGAACTAAAAAGAGAAGATGGACTAGAGTAATCAATAAGAGATATGCACAGGTAATTGATATGAGTT
ATGCCCTTCTACGCACAGCGCAAATATTTTCGGATACGAATAGAGATGGTTTATCTCTAGCTAGATTAGAATCCACTAATAATTGGCCTGGTTAATAGAA
AGAAGAATGATCGATCTTAACANACAAAATACAGGCCACAGTTAGTGAAGAAACCCATATAATCCTTTCTATAGATCTGATAATAAGGAGAATTGCCGAC
AAGAGGGAGAGAGATCGATGCTGGTGGN
>LE_HBa0138L01_T7_70801 (trimmed for quality and cloning vector)
AGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.36634
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0138L01
Clone
Clone name
hba-138l1
LE_HBa0138L01
C03HBa0138L01
P138L01
Clone type
BAC
Contamination
none
Estimated length
81,484
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found