Clone Read LE_HBa0145N02_T7_71667

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145N02_T7_71667
Primer
T7
ID from Seq. Facility
LE_HBa_145_N02-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
42 trimmed for vector and quality, 858 raw
Sequence
>LE_HBa0145N02_T7_71667 (raw untrimmed)
GGTGAATTGGGGCCGGGAGGTTCCTCCATATGTTATAGTTGTATGTGAGCCACTTAAATTAGTCAAACTAGCAGTGATACCTCGAAGATGGGACTTTACA
CCCCGAGTACAGATCAAGCTTGGCTGTCCGTT
ATGTTTTCGAGTTTTTTTATCCCTTCACCGATGTGCATTCTGCTATTTCCGGTGGTTTACTCCAGGGA
GTTAGTGACATCTCCTTTGAGGACACCTTCCAAGGGTTGTAACGATGGGTCCATCCTCCAGTGGCACAAAACACACACTAGCGGGCCTTCTGCTAACCAA
GTCCGAGGAACATTCGAGCACCAACTACGATCCCGTCTGCGAACGCACGAAGAAAGTCTGGCAGCTGCCATGCAACGCTGCCGGGGAACTCACCCACTGA
CTTAGGGTAATTCGTCTTGTGCATGTCCAACCAAGGACAGCCCTCGGCCAGCGAAGAACTCGAATCCATGGGAGAAATCTGTCCAGAACATGCCGATTTC
ATGGAAAGTGGAACGGCATGCAGTTTCCCGCGATACCAGATGCCGAGTTTAGCAAACATCCCTGCATTCTGGGACAATTAGACCGGAATCTTATGAGCGA
ACCAAGGTAAGGTGCCTTCACGCCCCCGGTAGAAGTACAACCTGGCCCTTGGCGGTGGAAGCCCAACCACCAAAACCTTGGACTTTTCCCTACACACTTT
CCTCCACGGAAACGTACCTTTCGCCCGAAGGGTGCTTCTTAGCACTTAAGATCCATCCTGTACCTGCCGGTAAAAAGGTCTTTCCCTCAGAAAATGAGTA
ATAACATTCGTCGGCCCGTCTCTCGTAAACTGGCTGCCCCGTTCACTGAACCTCCAGG
>LE_HBa0145N02_T7_71667 (trimmed for quality and cloning vector)
ATGTTTTCGAGTTTTTTTATCCCTTCACCGATGTGCATTCTG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.794392
Expected error %
1.59059
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145N02
Clone
Clone name
hba-145n2
LE_HBa0145N02
P145N02
Clone type
BAC
Contamination
none
Estimated length
114,691
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found