Clone Read LE_HBa0146A07_T7_71821

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0146A07_T7_71821
Primer
T7
ID from Seq. Facility
LE_HBa_146_A07-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
10 trimmed for vector and quality, 762 raw
Sequence
>LE_HBa0146A07_T7_71821 (raw untrimmed)
GAATTTTCACAGCCATGACTCTGACCATCAGCGGGCGTTTCATTATTTTCACTTTCTAATTTCACCCAAATTTTGCACTAGCGCAAAACGTCGTTCTTTG
TTCCGGAATTCATCTGTCGCAGATACTCTTTTAAGCTCAAAGGCCTTTCCTGATTTTTCCATATAAGTATGAGCTCTTCCTTATTATTGACTGAGTTTTT
CATTTCGACCTTATGTGGGGTTTAATTTCATACTGCTTCGTTTTGTGTAGTTGGTGAGTTGGTATTTCATTTATCGTCTAGTACAACACTCTTGACTCCT
ACATTCAAATCAGTCAATCGATTTTTGGAGGTTTGATCTTACATAGCAAATTTAAAAATAATTACAATTGGAGAAAGAATAAGGACATATCATTCGAATA
TATGAAAAACGCCACATAATCCTTATCATACTCACGACCACATTCACAACAGTATACACAGTTTCATCGATATCTGCCTTCATATTCTGTCGTTGATGCT
TAATTCCGTATCCACTGTTCTTTGTCGATCCCTTCTCTCTTCCTCCTCTTTTCCTCTCCTCCGTCCATACATCACCACTTCTGCCACACACGTGCACGCT
ACTACCACCACTTCCATTTACTACCCCGTCTCTTTCGATCTTATCGTACCATCCTACACGAACTCTCCTTATCCTCTCATAATTTCATTACTTTCCGTCC
TGACCCTCTATATATGACATGTAAATAATTTGATGTACTCACTCTGTTTATTTAATTTTATT
>LE_HBa0146A07_T7_71821 (trimmed for quality and cloning vector)
GTTGGTATTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.416113
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0146A07
Clone
Clone name
hba-146a7
LE_HBa0146A07
P146A07
Clone type
BAC
Contamination
none
Estimated length
78,087
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found