Clone Read LE_HBa0146K02_T7_72291

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0146K02_T7_72291
Primer
T7
ID from Seq. Facility
LE_HBa_146_K02-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
22 trimmed for vector and quality, 748 raw
Sequence
>LE_HBa0146K02_T7_72291 (raw untrimmed)
TCAGCAGCCCGAATATACACTGTTGATCACAAATCTTGAGATTCCCCTTTAACAACTAGAAACTTTAGTCCACAAGTTGGATATGTTTTTACCATGTGGC
ATACGATCAATTTCTTTAAAATAATTCAATAAAAAATGTATAGAACACTCTACAATGGAGTTGAGTTTATAGTCATAGACAAGGCCGATGAAGATACATA
ATGTATCCAAAA
TTTCTTAGAAGACATTCTATTTTGGTTCATATCTTTGATTCCAATATTCTTACTATGAGATAGTCAAGTTGTAATAGGAACGGTCGGG
AGAGTTATATTTATCGGTTAGCCTCATCTCTAATGACGATTACAGAATACCTTTTGGCTATTTCTCTCAAGTGAAATCACCACTATCAACTAGGAGAAGA
CTAAGAATCCGTACTTTGCCATATGTAGGTATTCTATACCTATATAATTATGTTATTGACCTTGCACTTGCTCAATCTCCTATCACTGACATGACGCATG
GTGAGCACCACGGATCAGAGCCTCCTCATCTCTATATGTCATATCTTTCGGAAAGACTATCCCCTATACTAGATATGTCTCCGTCTTGCCTCCTCTCTGA
ACCCCATCTCCCTGTCGTCTGGCTTCGTGGAACTCAGAAGGCGCTAGTTACACTGTCAACCCCTCTCTGTACGTTAGCTGTGACTAGTACTTTTCTTACA
TAAATGTAGACTGCTATCTTATATTAAGAAGAATCATTTATTCTATTG
>LE_HBa0146K02_T7_72291 (trimmed for quality and cloning vector)
TTTCTTAGAAGACATTCTATTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.16551
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0146K02
Clone
Clone name
hba-146k2
LE_HBa0146K02
P146K02
Clone type
BAC
Contamination
none
Estimated length
94,507
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found