Clone Read LE_HBa0153J02_T7_74547

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0153J02_T7_74547
Primer
T7
ID from Seq. Facility
LE_HBa_153_J02-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1045 raw
Sequence
>LE_HBa0153J02_T7_74547 (raw untrimmed)
CCCCCCATCCCCCGGCGGATCCTCCAACAAGTCGACCTCGCACTGCACTGCAAGCCTCTGAAATTAGTAGCACCTCGCATTACTCCTTTTAATGTGCAAT
ACCCTTTAATCATTCGATCCCGACGTTTCTATGTGCTTTTGTGTGTCGGTAGATGAGTCATCCTTATCCCACAACCGACTCTTCCATCCACATTTATTTA
CCACACACCCCTCCTATACACACATTTCATACAACATAATGATCCACAAACACATCAAAACTATGACAATGCCGCCGCTCGCCTTAACACCACCACTAAA
CTACCTCCTCTTTCACACTCCACACAACACCTCCTTATACATTTCTGTCATCTCCTCTCCCCCCCTCCATATCAATATTCAATTAAAAACTATCACACCA
CCCAACACTATTATTCTACAGCCCCTAATAAACATTCATTCCCACTTTATTCACACCTTCTCTCACACACCCACATCCTCATATAACTAATCTACTTAAA
TAACTTACACACCAAACCCACAACACCACCCCCCCCACCTACAACAATCCCAATAATATACAAACACCTACAGTCATACAAATATTATTTATACCATCAC
TTCACACGCTTACACTCAATTAACCTCTCACCAACTTTCCTATACTTTCTACAATTCCACTCCATACCCTCAATCTGCACTCCTATACCCTACAATCCCC
CATTCCCCTGCACACCATCCTTCTCTTCATCCCTCCCACTCCCTACCTACAACCCACCATACCACCCCCACTATCCCCCCCTCTCCCCTCCAACTTCATA
AACAATCAACAACTTCTCCTTTTACCCAACCCACTCTATACCCCATTTACATTACCCCTCCTCATATATTCATTCCCCATCTCCTCCCACCTCTTATCCT
CCATACATCACCCATCATACTTATTACAACCTCCTCACTTACCACTCTCCATCTCAATTACACACATCCCCTTCATCCCCTCTCTCCACTCATATCACCT
ACTAAACACAACCCTCACACATACAATCACTACTACCACCCTCAG
>LE_HBa0153J02_T7_74547 (trimmed for quality and cloning vector)
GAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.36701
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0153J02
Clone
Clone name
hba-153j2
LE_HBa0153J02
C03HBa0153J02
P153J02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found