Clone Read LE_HBa0153P19_SP6_74868

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0153P19_SP6_74868
Primer
SP6
ID from Seq. Facility
LE_HBa_153_P19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 797 raw
Sequence
>LE_HBa0153P19_SP6_74868 (raw untrimmed)
GATCACTCTACATAGCGGGGCGCGATCCATTTCTCTGTGAGCTGATTCTATGACATATCGACGCCCTACTTAACTTATATCATAGCAATTACATTATATA
GTATTAAACGAAACTATTTTNGATTAACCATGTCTTTACATCAACTAATTCATGTCCCTAGACTAACTACCTAACTACGCTGAAACATTACAAAGAACAC
ATCGTTCAGTTTCATAAGCTACTCCTAACACACTGTGGATATCCACATTGTTTTCCACTTCCAAGAACATTAGTTGAGAGTCACAAACATACCTTACTCT
ACGCACATAAA
GAATAATAGACCTCGAGTTCATAGATTCCTTCTCACGCACACTCCGCAAACTTGTCCTCACAGGCCAAAACGCAGCACGCTTCTATCCT
TCTCACCGCCGGACCATCCCGCCCATCGGCGGGTTTGTGTTGCCTTCACCTCCCGCTCAGCCGCCTCCCACTCTTTGCCCTTTCCTTTGCATCCTCTCTT
ACAGCCTACTCGATGATCCCGTAGTGTAATACACCCGCACCGTTGGCGCTCGCACGCATCACCCTTCTCCCCACTCTGCTTACGCTCTCTCCTGATGACT
ATCCGAATACCCGGCTCCATCTCCCTCTCCCCCCACTTCTCCTCACCCTCCCTTCTGCCCTCCCACCCCCGCCCGCCCACTGACGCCTCTCCANCCCACC
CTACCACATCTCTTAACACGCTCTTGGCGCCTAGTTTCCTCTCTCCTTCTGTTCCTACACTCTCCTTCCTCTCACACCTTTCCCTCTTCTACTTACT
>LE_HBa0153P19_SP6_74868 (trimmed for quality and cloning vector)
GAATA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.369607
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0153P19
Clone
Clone name
hba-153p19
LE_HBa0153P19
C03HBa0153P19
P153P19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found