Clone Read LE_HBa0153P19_T7_74869

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0153P19_T7_74869
Primer
T7
ID from Seq. Facility
LE_HBa_153_P19-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
81 trimmed for vector and quality, 882 raw
Sequence
>LE_HBa0153P19_T7_74869 (raw untrimmed)
GGGATCAAGGGGTCGTAGTTCATCATACATTAGTAGACACGTTAACTTGGACTCAACTGGTAACTAAATATTTCTGGCTTAGAGGATGCACATCTAGACA
CATCAACTAGGCCATCCCTTGTGTCCNTTTAACACTCCCAACTTCCCCTTTTATATTCTTCACCCCTCCTAAATTTATTTTCCATTTTCTCATCTAATCT
TCCACCATTCACATTACCTACCACTTTATATATCTTNATTTCCTCTCCCACAATTATATTTTTTTTATTTATATTTATTCCTTCTCTATCAAACTCCTCC
CATTAATCTCCATATACTCTATACTTTTTACCTACATTTACCTCCCTTTCAACTAATATCATATTATTTTATATATTTCTATTATATTCATTTCCCACTA
TTAATCTTTTAACTTACTATTCATTTAATCACTAAACCCATACTCACTTATCTTATATTTCTTTTCTTCCCTATTCTCTATCTTCCCTTTATACCCTTTT
TTATTTCTTCTTTCACTCTTTTCTTTTTTTTTTACCATAACCATTTTTCTTATTATTCTTCATCTACTTCTTTCTAATACTTACTTCATTTAAATTCTCA
TAAAACTAAATCAAACCTTTATCTATACTCAACTATCCCTTATCCTACTATATTTACTTTTTTTTATTTAATTATTTCATTCTTCTTTTTCCTTATTTTC
TTTTCTTTCTTCCTCCTCTTTCTATTTCCTCTTTAACATTCATTAATCCTCTTTTAACTTTTATACCTCTTTCTCTCATTTATCTCACTATCTTATTCAT
TCTACATACCCCACTCTCCATCCAATTTTTCTTCTTCTTTTTCCTTTTCTATTATCTTCCTTTTTTTTTTTCTCTTTTATAT
>LE_HBa0153P19_T7_74869 (trimmed for quality and cloning vector)
ATACATTAGTAGACACGTTAACTTGGACTCAACTGGTAACTAAATATTTCTGGCTTAGAGGATGCACATCTAGACACATCA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.902174
Expected error %
1.04395
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0153P19
Clone
Clone name
hba-153p19
LE_HBa0153P19
C03HBa0153P19
P153P19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found