Clone Read LE_HBa0154J16_T7_75343

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0154J16_T7_75343
Primer
T7
ID from Seq. Facility
LE_HBa_154_J16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
42 trimmed for vector and quality, 879 raw
Sequence
>LE_HBa0154J16_T7_75343 (raw untrimmed)
CTAACTCGGGTCCGGGGAGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGACTTCCATGTTAGGAGGTCTCCGATAAACTCCTCCGGCCGGCGAAA
GCGAGGGGNNNCCCTCCTAAAAAGAGGTGNNNGNANNNGGNNNGNNNAGNGNGGNGANNNNNNNANGNGGNNNGNGAGNNANNGNANAGGAGAGGAGANN
NNANNNAGNGNANANNNAAAGGGNAGNAGNAGNGAGNNNNNGNAGGNANAAAAAAANNNNNNAAANNNNGNGANANNGAGNNAAAAANANANAGAANGNA
NNNAAGNANNNNNNGNGGNNNNAAANANGNNANNNNGAAAAANNAAGAANAAAGAANANNNANANNAAGGAAAAGAGANGNNGNNNNNNAAANNGANNAA
AAAGAAAAANAAAAGAAANAAAAAAAANAAGGGNGANAGGGGNNGGNGGAGGAANAAAGAAAGNANNAAANNNGGGGGAGGNAGAAGAANAAGAAANNGG
ANNANNAGAAGGAAAAAGNGAGAAAAAGGGGGAAAAGAAGNNGAAGGAAGAAGAGAGAGAAANNANNGGAAAGAAGGGAAAGGAAAGAGAAANNNGAGAA
GGGAAAAAGAAAGAGGAGAAGAAAGNNAAAGGAAGGGGGAGGGAAAAAAAAGAAANGAAAAAAAGGGAGGAAAAAGGAAAAAGAGAAAGGAAAAGGAGAG
GAAAGGGAAAAAGAAAGGGAGGGGAGGAAAAANGAGGAAAAAAAAAAAAAAAGGGAAAAAAAAAAAAAAGAAGAAAAAGAGAAAGAGGGGAGGNAAAGAA
AAAGAAAAAAAAAAAAAAAAAAAAAGAGAAGAAAAAAAAAAGGAAGAAGGAAGAAAAAAANGGGAGAGAAAGAGAGGGA
>LE_HBa0154J16_T7_75343 (trimmed for quality and cloning vector)
CTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGACTTCCATG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.70814
Expected error %
0.732336
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0154J16
Clone
Clone name
hba-154j16
LE_HBa0154J16
P154J16
Clone type
BAC
Contamination
none
Estimated length
81,729
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found