Clone Read LE_HBa0157F23_SP6_75932

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0157F23_SP6_75932
Primer
SP6
ID from Seq. Facility
LE_HBa_157_F23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1321 raw
Sequence
>LE_HBa0157F23_SP6_75932 (raw untrimmed)
CATTGCGTGCTAGCACCTCCCGCCGTCCTGTCACCGTATTGGCGGGAATATCGCGTTCTGTATTTGCATCATCGAATTTCTCGCCGGTGGTGGGTAGNGG
TAGAGATAGTATGTTGACTTTGCACTGTCTCATCTTCCCCCCCTCTTATATCTCCTCTAAATCACGCGTCACTGTACTACTGCTGCTTTAGCTAAAAGGA
TTCGCTCTCTATCCTATNCTTACCATCGCTTTTATACTTGTCTTAGACTTTTGCATAGGCAATTGTATAGTTTGATTACTTGT
AATCTATCTGAATCAAA
TTAACGCATTGTATCGTAAGTCCTCTTTCGAATCCTCTACATTCTTACTATCGGATTACTCTCTTACTACCTTCTATCGTGCACATTTTTCCTCTCTCTA
CTATCACTTCATTAATCATTGTCTATAATATGTGATTTTTACTTTATATATTCTATTTTTCCTCTTTCATATTGCTTAATGATCTCCGTGACACTCATCT
CTTCTTTCTCTCACCGTATATCGTCTCATCTTTATATGCACCAAGTCTAAACAATAGTATGATCTTATAAGAACAGAGAAGAAAGATACATCAAAATAGT
TTAAACAGCTACTAATATGCAGGATTGATCATATCATTATCCTCCACACACTGCCACACTAGCTATANATGCTACATGCGGACTCTCCTATCGCAAACTA
CTCACTATATCNCTACTTATTTCTTTGTACTATAATCAATTCGCTTTATTAACTCTTATGCTTTTATTATCTATATAAATCTTAATCATCATATATAATC
TCAAGTCATNTTTCAACTCTTATAATTCTCTCTACTTATCTATTCTCACAGCCATGCCTACCTCTTTCTTCCTTTCGTGCTCGTGATCCGCGCGTTCCGA
CGTTATCTGACTATTGACTCTATATTATTCTTCTCGATGATATGCTGCCTCTACACAATGCACATATACACTTCATGATCTCTTTACAATTACTTTCCCT
CATCGCCTGCGTCTATGCCAGACTACACCTTGCCTGTCTGATCAGCTCCTTAGCGCCCTGTCTGCTTGTCGCCCTCTCTCTCACNCTGGCTCTCTACTTT
TCACTCTCTTCTAAATGCTCTGCTATCAACTTATTTCTTTCTACTTTTTCATCTTCTTCTAGTCTCATTTACGTACTTTACATTGACCACTATCTTTAGC
TCCTACTCCCCACTCCACNTCTCTCACTCTACGCTTGCNACAACACCTATCTACCTCTCTATCGCTGTCTTGTAGTGCACATCTCTACTGTCACATCTGA
TATTATTGTACGCTGCATACA
>LE_HBa0157F23_SP6_75932 (trimmed for quality and cloning vector)
AATC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.940096
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0157F23
Clone
Clone name
hba-157f23
LE_HBa0157F23
P157F23
Clone type
BAC
Contamination
none
Estimated length
115,979
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found