Clone Read LE_HBa0157F23_T7_75933

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0157F23_T7_75933
Primer
T7
ID from Seq. Facility
LE_HBa_157_F23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
180 trimmed for vector and quality, 906 raw
Sequence
>LE_HBa0157F23_T7_75933 (raw untrimmed)
GGCTTTCCCCCATGACCGGGCCCGGGGTTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCTCCAAGATTCGAGGGGCCCCCTTTGTGTACTTCTCGA
ATTGTTGGATGATGTAGAGGGTGCCCCTATGTGGTCGATCTCCGAGAACGTCAGAAAGCAGTTCGTTGTTTCAAGTCGATCTTCGAAAAGAACTCCGTCT
ATCACTCCTTCGAAGAGTTATGTAGTTGATGTTGTAGCTTGTTGGAGATTTTTCCTTGACCCCTTCCTGAATGTTTTGTCTATGCCCTCTATTTTAACTT
CAATGGGTGTACTATCAGCTATGTTCGTTCACCAGCTGTCCCCCGATTAAGTTCCTATGTCTGAAATAGAATTCTCGTCTCGGTTGATTTCGACTTTATT
TAGTGACTCATTTTAGTTAGGAGTGCTCGGTGCGTTATCTTTTGTTATAACACGATTTTAAGACTCCTTACTTCCATATTTTATTTTTTCTACATTTGTC
CTTCTTTTTTACTATCTCTTCTCCTTGTTTCTCCATCATATTTTTACTCTTTGTTTATAGTTGTGATTTTTCCTCCGTCCTATGCTCTCCCTTCTCTTCT
TTTTTTTCTTGCTTGTTACGTCTCTGTTCCGTCCTTCTCTTTCTCTGTTGACTTTCTTTTATTTTGCCTATTGTTTTTCCGCACTTACCGTGCCACTATG
GATATCCTGCGCCTGAACGGTGCTTGTCCTCTGGCATTTTTTTTCTGTTCGTTGTCTTTTCTAGTCGTCCTTGTCTTTCACGCGCCTATATTGTCCAGTG
CAATGGCTAGTACTGTTCGTGCTCTCAACCGTTTGTTGGTGTTATTTCTTCTTTATTGCTTAATCTTTCTTCTGTTTTGTTTTGTATGAGGCGTTGGTGC
TGTTTG
>LE_HBa0157F23_T7_75933 (trimmed for quality and cloning vector)
AGCTTTCTCCAAGATTCGAGGGGCCCCCTTTGTGTACTTCTCGAATTGTTGGATGATGTAGAGGGTGCCCCTATGTGGTCGATCTCCGAGAACGTCAGAA
AGCAGTTCGTTGTTTCAAGTCGATCTTCGAAAAGAACTCCGTCTATCACTCCTTCGAAGAGTTATGTAGTTGATGTTGTA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.951797
Expected error %
3.84339
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0157F23
Clone
Clone name
hba-157f23
LE_HBa0157F23
P157F23
Clone type
BAC
Contamination
none
Estimated length
115,979
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found