Clone Read LE_HBa0166N17_SP6_78608

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0166N17_SP6_78608
Primer
SP6
ID from Seq. Facility
LE_HBa_166_N17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
566 trimmed for vector and quality, 842 raw
Sequence
>LE_HBa0166N17_SP6_78608 (raw untrimmed)
TATTTTGATCAATTTTGAGCAGAATCGACGGTCCAGTCAAAGGTCCGTCGACTGACTTAAAGACCGTCAATGGGGTATCATCGGTTAACAAAAACCAGTG
ACCCAACCACACCCGACCGGCTATACTAAAAATTAAACCATTCACATACCTTCCCTTATCTTTTAAAATTCCCTCCCAACTGTTTCCCTCCCCGTATTCC
CTTCCCCCTCCATTAACTCCCACACCCACTCCCTTCCATTTTCTTAAATAACCCACAAGTCCCAAACTCCCTGAAATCCCAAAATCCTAACATCCCTATT
TTCTGCTCTGACTCCCTTGTTTTCTCCCATCGGCGTTCGAAGGCAACCACGTAGGTTGGTTGTTGAGAAGATCACCCACTCACTCACTCCACTATTGATG
TCAAGTATTTCAATTCACATAGTATAATAAATTCTCATTCATTTGTTGTTGAAAAAGCATAAATTGTTTGTGGGTCTTGACTTAGGGACAAATTTGCATG
TTAAAATTGTGAAATTTTGGATTCTATGTCCCTTAGAATGATAGAAAGTGAATGGGTTGGGGGTGGAATCTGTGTCAATATGATTGTTTTTCTGACTTAG
GGTTTGATAGCCTCATATAATCTGTGATCGACACTTGCAAAATTGATTCCCTTAATGATGATTAATCAGTGTTCCACTTATTATTATGTGTTGGGTGAAA
TTTGTGATTTGTAAAATGTTGCCCATATATTGGGGCTAAGAAGATATTTTCAAAATTAGTTCTCTTTATAATATATAAAAGACCACATTTTACTGGACAT
TCCGTTGATTTGACCGAACCATTCATTGGGGTTCCCCAATGT
>LE_HBa0166N17_SP6_78608 (trimmed for quality and cloning vector)
AATCGACGGTCCAGTCAAAGGTCCGTCGACTGACTTAAAGACCGTCAATGGGGTATCATCGGTTAACAAAAACCAGTGACCCAACCACACCCGACCGGCT
ATACTAAAAATTAAACCATTCACATACCTTCCCTTATCTTTTAAAATTCCCTCCCAACTGTTTCCCTCCCCGTATTCCCTTCCCCCTCCATTAACTCCCA
CACCCACTCCCTTCCATTTTCTTAAATAACCCACAAGTCCCAAACTCCCTGAAATCCCAAAATCCTAACATCCCTATTTTCTGCTCTGACTCCCTTGTTT
TCTCCCATCGGCGTTCGAAGGCAACCACGTAGGTTGGTTGTTGAGAAGATCACCCACTCACTCACTCCACTATTGATGTCAAGTATTTCAATTCACATAG
TATAATAAATTCTCATTCATTTGTTGTTGAAAAAGCATAAATTGTTTGTGGGTCTTGACTTAGGGACAAATTTGCATGTTAAAATTGTGAAATTTTGGAT
TCTATGTCCCTTAGAATGATAGAAAGTGAATGGGTTGGGGGTGGAATCTGTGTCAATATGATTGTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.950101
Expected error %
0.229919
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0166N17
Clone
Clone name
hba-166n17
LE_HBa0166N17
P166N17
Clone type
BAC
Contamination
none
Estimated length
86,199
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found