Clone Read LE_HBa0016B10_T7_78787

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0016B10_T7_78787
Primer
T7
ID from Seq. Facility
LE_HBa_016_B10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 830 raw
Sequence
>LE_HBa0016B10_T7_78787 (raw untrimmed)
AGAAGGAGCGACTTAGAAGAATGTGAGAGAGTAAGAGAAACCAATTCACAGGGAGATATAATAAGATAAGGGACTGCACGAGGGGGCTGCGAGGGGAACG
GGTGCGTGCGAGATAGTGCGATGGGAAGAGTACGAGCTGTAGATACAGTTATGTGTGTAGTGTGATATTGATTTGGGTGCCTGGCGGAGGGTCGGATGCA
CGTACTGTATATGTTGCTTGTCTAGATAGGTAGAGGAAAAAATGTATGGAGAAATAAAAAATAGGGAACTTTTTATTTCATAAAAAATTAGGGAGATGAT
AATGGTGAATATAGTTGATGAATGATTTGTTTTTTGAGTTGGAATGTGAGATTGGTGACAAGGAGGAAGAGAGAATATATGAAATAGATGAGGTGGATAG
GGTGAGGGGAGAGGAGAAGTGGGGGGGAAGGGAGAGGGGGAGTAAAACGAGGAGTGGAAAATGTTTTTATTTGTTTATATTTTGTTTTTTTGGTGTTTTT
CTTTTATTTTTTTGTTTGTTGTTTTATTTTTGTC
TTTTTTATGTGTTTATCTGAATCATGTCGTTAATATGGAGCTGTAGATGAGTTTTCAAATACGCAT
GTAGTGATATTGTGTAGGTTTATACTTGTGTTAAAGAAATAGAGGCGATAGATAAAAATGAATGAAAAGGAGGCGAGGATGTTCAGCAGCGGTCAGAAAG
GGTGAGGGGAGGAGGGACGAAAGAACTGGAAGGTGCGAGGAGAGGGAGGAGGAATGGAGGAGGGTGGGGGATAAGGAACGTAGGATAATGATGCCATTAG
GCAAAGCTTAAATGATGTATGTAGTGAAAA
>LE_HBa0016B10_T7_78787 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.55195
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0016B10
Clone
Clone name
hba-16b10
LE_HBa0016B10
P016B10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found