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Clone Read LE_HBa0021H15_SP6_79852

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0021H15_SP6_79852
Primer
SP6
ID from Seq. Facility
LE_HBa_021_H15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
423 trimmed for vector and quality, 830 raw
Sequence
>LE_HBa0021H15_SP6_79852 (raw untrimmed)
GGTTGAGGAGCAGTGTAATGAATCAGCTTATTTTCAAGAGACTATTTATTGGTATCTTTTAGGTAACTTAATACCGTACACATTTATATAAACTCTTACT
TTTAATATTGATATGACTTCAATTTAAATGACAATCTTCTTTTTAGAAAAATATCTCC
AAAAGTTATATATCGAAATTAGAGTGATAAAAAAAATCTCTT
ATCAAAGTAATTTTTTTTCACTACTACTAGCATATATATATGAATAACAAATATTTTTGAATTTTGATATTCAAGAGTTATGTTCACTTTAGTGGTTTTC
ATATACTGATTCCATCAATATCAATATCCATTTTATTATTTAGTGTTTTCTAGGTTTAGCAATAGTTATTCACTATAATATTTTGAGAAGTTCAGTAATA
TTTGTTCATTTTATAAAATTAATTTAATAATTTTATATTTAATTTATAATTTACTTTTATCATTAATTATAATTATTTTTTTTATTATATTTTTCAAAAT
GATATATTTATAATATTTAAAAGGTAATATAGTAATAATTTCATTAAGAAATGTAATAATAAGTAGCGAGTAGTGGACAAGTAATTATTTGCATCCGGTG
AATACTAGTATATGGAGCATTTTAACACATAAACATTTTTATTTTTTCAAAAAAAAAGAAAAAGTGAAAAAAAAAGAAGAACTGGTCTTCTTGTGTTGGG
ATTTTGAGTTTACCTGCAATCTAACCTCGACTAAAAAAACTATTCCTTTTGGACTATCCAAGGGTGGGTTGTTTTCCTATATAAAAGATTCTAATGAACC
TTTGGAAAAATTCGCGACATCCCCAACATT
>LE_HBa0021H15_SP6_79852 (trimmed for quality and cloning vector)
AAAAGTTATATATCGAAATTAGAGTGATAAAAAAAATCTCTTATCAAAGTAATTTTTTTTCACTACTACTAGCATATATATATGAATAACAAATATTTTT
GAATTTTGATATTCAAGAGTTATGTTCACTTTAGTGGTTTTCATATACTGATTCCATCAATATCAATATCCATTTTATTATTTAGTGTTTTCTAGGTTTA
GCAATAGTTATTCACTATAATATTTTGAGAAGTTCAGTAATATTTGTTCATTTTATAAAATTAATTTAATAATTTTATATTTAATTTATAATTTACTTTT
ATCATTAATTATAATTATTTTTTTTATTATATTTTTCAAAATGATATATTTATAATATTTAAAAGGTAATATAGTAATAATTTCATTAAGAAATGTAATA
ATAAGTAGCGAGTAGTGGACAAG

This is probably not a useful sequence.

Problems:
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.820861
Expected error %
0.9838
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0021H15
Clone
Clone name
hba-21h15
LE_HBa0021H15
C02HBa0021H15
P021H15
Clone type
BAC
Contamination
none
Estimated length
111,627
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found