Clone Read LE_HBa0052N09_SP6_81664

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0052N09_SP6_81664
Primer
SP6
ID from Seq. Facility
LE_HBa_052_N09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 858 raw
Sequence
>LE_HBa0052N09_SP6_81664 (raw untrimmed)
GCGAGGCGGAGGCATGTCTAGCGCGAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT
NTNTNNTTTNNTTTNTNTNTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTT
TTTTNNNNNNTNTNNTTNTTTTTTNTNTNTTTTTTTNTNTNT
TTTNNTTTNNTTTNNTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTNTNTTNTTTNTTTTNNTTNTTTTTTTTTTTTTNNTTTTTTTTT
NTTTTTTTTNTTTTTTTTTTNNTTTTTTTTNTTTTTTTTTNTTTTTTTTTTNNTTTTTTTTTTTTTTTTNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTN
TTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTNTTTTTTTTTTTNTTTTTTTTTTNNTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTNT
TTTTTTTTTNNTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTNTTTTNTNTTTTNNTTTTTTTTT
TNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTNTTTTTTTT
>LE_HBa0052N09_SP6_81664 (trimmed for quality and cloning vector)
TTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.88133
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0052N09
Clone
Clone name
hba-52n9
LE_HBa0052N09
C06HBa0052N09
P052N09
Clone type
BAC
Contamination
none
Estimated length
108,996
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found